RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TGM2P21980 687 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ATP6V1E1P36543 226 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 BRCC3P46736 316 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ARFIP2P53365 341 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 EPHB3P54753 998 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 CAPSQ13938 189 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 PDK1Q15118 436 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 KLHL38Q2WGJ6 581 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ACAD11Q709F0 780 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ASRGL1Q7L266 308 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 RRM2BQ7LG56 351 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 AGGF1Q8N302 714 aaeCLIP8.48□□□□□ -1.054e-12■■■■□ 25.3
PTPDC1-204ENST00000620992 C12orf29Q8N999 325 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 TMEM176AQ96HP8 235 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SENP8Q96LD8 212 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 PDLIM7Q9NR12 457 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC17A7Q9P2U7 560 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 MYH9P35579 1960 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ERI2A8K979 691 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 F8W8V4 182 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SYNCRIPO60506 623 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ENTPD5O75356 428 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ATP4AP20648 1035 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 AMPD1P23109 780 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 KPNA1P52294 538 aaPredicted RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ARHGDIAP52565 204 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 GPX6P59796 221 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SPDYE7PQ495Y7 208 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 RABGAP1LQ5R372 815 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 TLDC1Q6P9B6 456 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC27A1Q6PCB7 646 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 UNC45BQ8IWX7 931 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 MIER2Q8N344 545 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF570Q96NI8 536 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 FAM111AQ96PZ2 611 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 CATSPERBQ9H7T0 1116 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 NKX1-2Q9UD57 310 aaPredicted RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC24A2Q9UI40 661 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 TCRBV7S3A2A0A539 114 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 RHOCP08134 193 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 CCNB1P14635 433 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 OR1E1P30953 314 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 CTNNB1P35222 781 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 RPL22P35268 128 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 PNPLA4P41247 253 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 STILQ15468 1287 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 OASLQ15646 514 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 LRRC6Q86X45 466 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 NAT16Q8N8M0 369 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 SNX31Q8N9S9 440 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 FAM13CQ8NE31 585 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 DNERQ8NFT8 737 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 CPT1BQ92523 772 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 MANSC1Q9H8J5 431 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 MID2Q9UJV3 735 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 AP4E1Q9UPM8 1137 aa8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 DRG1Q9Y295 367 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-204ENST00000620992 CLDN5O00501 218 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 SEC24DO94855 1032 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 SUPT7LO94864 414 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ITGAVP06756 1048 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 OR4Q2P0C623 313 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 GCKP35557 465 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 SKIV2L2P42285 1042 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 WASP42768 502 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 BLVRAP53004 296 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 IKBKEQ14164 716 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 SNX17Q15036 470 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TAF5Q15542 800 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 NFE2Q16621 373 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 PTPN20Q4JDL3 420 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 C1orf146Q5VVC0 180 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 RELL1Q8IUW5 271 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 BRSK2Q8IWQ3 736 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 GRIN3AQ8TCU5 1115 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 DENND1AQ8TEH3 1009 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 UTP4Q969X6 686 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TSSK1BQ9BXA7 367 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TRPV6Q9H1D0 765 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 UPF3AQ9H1J1 476 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 HEY2Q9UBP5 337 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 HAUS5O94927 633 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 IL1R2P27930 398 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ACADSBP45954 432 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 CLDN10P78369 228 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 PTK7Q13308 1070 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 BMPR2Q13873 1038 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 DDR2Q16832 855 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 C15orf59Q2T9L4 293 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 BOLA3Q53S33 107 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TAF2Q6P1X5 1199 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TMEM130Q8N3G9 435 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ARMC2Q8NEN0 867 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 USP6NLQ92738 828 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms