RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 IFI35P80217 286 aaPredicted RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 FPGSQ05932 587 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 TWF1Q12792 350 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 SMARCB1Q12824 385 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 XRCC4Q13426 336 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 OLIG2Q13516 323 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 PDK1Q15118 436 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 LRIG3Q6UXM1 1119 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 ARHGEF18Q6ZSZ5 1173 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 BEND5Q7L4P6 421 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 PCGF5Q86SE9 256 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 CIR1Q86X95 450 aaPredicted RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 IGDCC3Q8IVU1 814 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 CMTR2Q8IYT2 770 aaKnown RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 ATP6V1G3Q96LB4 118 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 TRIM56Q9BRZ2 755 aaKnown RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 GKN1Q9NS71 199 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 SHOC2Q9UQ13 582 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 TLR6Q9Y2C9 796 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 TTLL3Q9Y4R7 772 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 PRRC2BQ5JSZ5 2229 aaKnown RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 E7EVH7 732 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 E9PAM4 449 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 ABLIM3O94929 683 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 NUDT17P0C025 328 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 ELF1P32519 619 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 MLLT6P55198 1093 aaPredicted RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 PLD1Q13393 1074 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 BRMS1LQ5PSV4 323 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 TMEM240Q5SV17 173 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 CENPUQ71F23 418 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 TMC7Q7Z402 723 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 DDX53Q86TM3 631 aaKnown RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 FIBCD1Q8N539 461 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 FAM76AQ8TAV0 307 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 USP33Q8TEY7 942 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 HAPLN3Q96S86 360 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 CYP2S1Q96SQ9 504 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 WDR83Q9BRX9 315 aaKnown RBP12.67□□□□□ -0.38
TP53-219ENST00000610538 FAM129AQ9BZQ8 928 aa12.67□□□□□ -0.38
TP53-219ENST00000610538 TRDMT1O14717 391 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 RASGRF2O14827 1237 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 CNTN5O94779 1100 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 CNPP09543 421 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 MYOGP15173 224 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 HMGA1P17096 107 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 SPARCL1Q14515 664 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 PPP2R5DQ14738 602 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 RAP1GAP2Q684P5 730 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 BZW1Q7L1Q6 419 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 PDIK1LQ8N165 341 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 ZNF567Q8N184 647 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 ARHGAP18Q8N392 663 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 FBXO36Q8NEA4 188 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 PYROXD1Q8WU10 500 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 MYEOVQ96EZ4 313 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 KLC2Q9H0B6 622 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 OSBPL2Q9H1P3 480 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 NEU3Q9UQ49 428 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 CHMP2BQ9UQN3 213 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 SHROOM3Q8TF72 1996 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 CFAP69A5D8W1 941 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 C2orf78A6NCI8 922 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 PPP1R12AO14974 1030 aaPredicted RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 EFCAB14O75071 495 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 GCATO75600 419 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 HCAR3P49019 387 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 ARL4CP56559 192 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 AUHQ13825 339 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 KCNJ11Q14654 390 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 MS4A13Q5J8X5 152 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 C3orf62Q6ZUJ4 267 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 UBE2Q1Q7Z7E8 422 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 CFAP52Q8N1V2 620 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 AGGF1Q8N302 714 aaeCLIP12.66□□□□□ -0.38
TP53-219ENST00000610538 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 C2orf15Q8WU43 125 aaKnown RBP12.66□□□□□ -0.38
TP53-219ENST00000610538 RTP4Q96DX8 246 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 SMPD4Q9NXE4 827 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 CLIC5Q9NZA1 410 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 UBP1Q9NZI7 540 aa12.66□□□□□ -0.38
TP53-219ENST00000610538 DOCK6Q96HP0 2047 aa12.65□□□□□ -0.38
TP53-219ENST00000610538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.38
TP53-219ENST00000610538 C5orf60A6NFR6 353 aa12.65□□□□□ -0.38
TP53-219ENST00000610538 POC1B-GALNT4F8VUJ3 575 aa12.65□□□□□ -0.38
TP53-219ENST00000610538 TLL1O43897 1013 aa12.65□□□□□ -0.38
TP53-219ENST00000610538 CXCL14O95715 111 aa12.65□□□□□ -0.38
TP53-219ENST00000610538 APOEP02649 317 aa12.65□□□□□ -0.38
TP53-219ENST00000610538 IVLP07476 585 aa12.65□□□□□ -0.38
TP53-219ENST00000610538 PSMB4P28070 264 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms