RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CLEC4EQ9ULY5 219 aa10.61□□□□□ -0.71
LRRC28-221ENST00000561276 PYCARDQ9ULZ3 195 aa10.61□□□□□ -0.71
LRRC28-221ENST00000561276 PIAS3Q9Y6X2 628 aa10.61□□□□□ -0.71
LRRC28-221ENST00000561276 IGLV3-10A0A075B6K4 115 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 TYW5A2RUC4 315 aaKnown RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 GRID2IPA4D2P6 1211 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 KRBA1A5PL33 1030 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 HOXC11O43248 304 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 DCXO43602 365 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 CACNG3O60359 315 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 TULP3O75386 442 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 PALMO75781 387 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 CNTN5O94779 1100 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 LRIG2O94898 1065 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 KRT7P08729 469 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 ALADP13716 330 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 CD72P21854 359 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 HOXD9P28356 352 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 CTHP32929 405 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 GJC1P36383 396 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 OPRD1P41143 372 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 IRAK1P51617 712 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 PRKCQQ04759 706 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 SEMA3BQ13214 749 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 MLF2Q15773 248 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 ALFQ53S48 1182 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 PPP6R3Q5H9R7 873 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 ZFYVE27Q5T4F4 411 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 TPRG1Q6ZUI0 275 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 POLNQ7Z5Q5 900 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 C12orf40Q86WS4 652 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 RHOT1Q8IXI2 618 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 SYCE1Q8N0S2 351 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 CCAR2Q8N163 923 aaKnown RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 SIX5Q8N196 739 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 CARNMT1Q8N4J0 409 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 KCTD6Q8NC69 237 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 FIBINQ8TAL6 211 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 FAM3CQ92520 227 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 SHDQ96IW2 340 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 PNKPQ96T60 521 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 SLC2A11Q9BYW1 496 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 ZYG11BQ9C0D3 744 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 FBRSL1Q9HCM7 1045 aaKnown RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 DEC1Q9P2X7 70 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 PPARGC1AQ9UBK2 798 aaKnown RBP10.6□□□□□ -0.71
LRRC28-221ENST00000561276 AMFRQ9UKV5 643 aa10.6□□□□□ -0.71
LRRC28-221ENST00000561276 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 SHISA7A6NL88 538 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 PI4K2BG5E9Z4 385 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 H0Y626 953 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 EEF2KO00418 725 aaKnown RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 TRIM24O15164 1050 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CLDN11O75508 207 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 LUC7L3O95232 432 aaKnown RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CISD3P0C7P0 127 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 GOT1P17174 413 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 HCAR3P49019 387 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 DGKGP49619 791 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CDH4P55283 916 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CDH6P55285 790 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 STARD6P59095 220 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 SIGLEC14Q08ET2 396 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 ZNF177Q13360 481 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 PON2Q15165 354 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 DPYSL2Q16555 572 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 FSCBQ5H9T9 825 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 MANEALQ5VSG8 457 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 LRRC38Q5VT99 294 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 TTC39BQ5VTQ0 682 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 NAIF1Q69YI7 327 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 RWDD4Q6NW29 188 aaKnown RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 TXNDC11Q6PKC3 985 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 ZNF852Q6ZMS4 543 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 PEX26Q7Z412 305 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 NT5DC3Q86UY8 548 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CIR1Q86X95 450 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CCDC117Q8IWD4 279 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 ETFBKMTQ8IXQ9 262 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 FAM71BQ8TC56 605 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 WFDC5Q8TCV5 224 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CD101Q93033 1021 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 KCTD15Q96SI1 283 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 EPAS1Q99814 870 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 P2RY13Q9BPV8 354 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 COL25A1Q9BXS0 654 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 ARHGEF3Q9NR81 526 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 DNAJC17Q9NVM6 304 aaKnown RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CWC15Q9P013 229 aaKnown RBP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.59□□□□□ -0.71
LRRC28-221ENST00000561276 CAPN6Q9Y6Q1 641 aa10.59□□□□□ -0.71
LRRC28-221ENST00000561276 A0A0A0MRY4 1105 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 A0A1B0GVM2 712 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 TCAF2A6NFQ2 919 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 USP27XA6NNY8 438 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 MAN2B1O00754 1011 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 DAPK3O43293 454 aa10.58□□□□□ -0.72
LRRC28-221ENST00000561276 FTCDO95954 541 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms