RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 VSTM4Q8IW00 320 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 MFN1Q8IWA4 741 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 CHPFQ8IZ52 775 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.49□□□□□ -0.41
USP8-212ENST00000560730 TSTD1Q8NFU3 115 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 CENPIQ92674 756 aaPredicted RBP12.49□□□□□ -0.41
USP8-212ENST00000560730 NKD2Q969F2 451 aaPredicted RBP12.49□□□□□ -0.41
USP8-212ENST00000560730 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 MAGEB5Q9BZ81 275 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 TPSD1Q9BZJ3 242 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 CD248Q9HCU0 757 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 THAP10Q9P2Z0 257 aaPredicted RBP12.49□□□□□ -0.41
USP8-212ENST00000560730 VANGL2Q9ULK5 521 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■■□□ 16.2
USP8-212ENST00000560730 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 STON1Q9Y6Q2 735 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 RALGAPA1Q6GYQ0 2036 aa12.49□□□□□ -0.41
USP8-212ENST00000560730 MUC22E2RYF6 1773 aaPredicted RBP12.49□□□□□ -0.41
USP8-212ENST00000560730 THADAQ6YHU6 1953 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 AXIN1O15169 862 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 RTN2O75298 545 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 SERPING1P05155 500 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 TPM3P06753 285 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 GZMAP12544 262 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 HOXB2P14652 356 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 GPD1P21695 349 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 SDC4P31431 198 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 IL12RB1P42701 662 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 NUMBP49757 651 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 DGKEP52429 567 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 OGDHQ02218 1023 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 MAMLD1Q13495 774 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 ZNF234Q14588 700 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 MBLAC2Q68D91 279 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 PLEKHA7Q6IQ23 1121 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 ANO7Q6IWH7 933 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 TRMT11Q7Z4G4 463 aaKnown RBP12.48□□□□□ -0.41
USP8-212ENST00000560730 RASSF3Q86WH2 238 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 ZNF683Q8IZ20 524 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 CCAR2Q8N163 923 aaKnown RBP12.48□□□□□ -0.41
USP8-212ENST00000560730 MDGA1Q8NFP4 955 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 OR52K2Q8NGK3 314 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 CYB5D2Q8WUJ1 264 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 VCPIP1Q96JH7 1222 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 RPRD1AQ96P16 312 aaPredicted RBP12.48□□□□□ -0.41
USP8-212ENST00000560730 MCEEQ96PE7 176 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 GABRG3Q99928 467 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 EBF1Q9UH73 591 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 INVSQ9Y283 1065 aa12.48□□□□□ -0.41
USP8-212ENST00000560730 A0A087X0T9 212 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 CCDC163A0A0D9SF12 145 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 TCRBV21S2A2A0A5A6 115 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 TYW5A2RUC4 315 aaKnown RBP12.47□□□□□ -0.41
USP8-212ENST00000560730 H0Y626 953 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 DCLK1O15075 740 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 CCP110O43303 1012 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 TIMM44O43615 452 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 GFRA3O60609 400 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 CNTN5O94779 1100 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 LMNAP02545 664 aaKnown RBP12.47□□□□□ -0.41
USP8-212ENST00000560730 FAM228BP0C875 321 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 PRKCHP24723 683 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 HNRNPH3P31942 346 aaKnown RBP12.47□□□□□ -0.41
USP8-212ENST00000560730 HDAC4P56524 1084 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 CDH18Q13634 790 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 ENPP2Q13822 863 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 EIF4HQ15056 248 aaKnown RBP12.47□□□□□ -0.41
USP8-212ENST00000560730 LPAL2Q16609 132 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 C5orf22Q49AR2 442 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 RABGAP1LQ5R372 815 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 APCDD1Q8J025 514 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 WFIKKN2Q8TEU8 576 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 FAM172AQ8WUF8 416 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 UCMAQ8WVF2 138 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 HMGB4Q8WW32 186 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.47□□□□□ -0.41
USP8-212ENST00000560730 TRIM7Q9C029 511 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 SLC6A17Q9H1V8 727 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 EPC1Q9H2F5 836 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 SEMA4AQ9H3S1 761 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
USP8-212ENST00000560730 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
USP8-212ENST00000560730 A0A1B0GVM2 712 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 TCAF2A6NFQ2 919 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 HLA-EP13747 358 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 GABRG2P18507 467 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 POLR2EP19388 210 aaKnown RBP12.46□□□□□ -0.41
USP8-212ENST00000560730 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.41
USP8-212ENST00000560730 ADRA1BP35368 520 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 CSKP41240 450 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 CTSOP43234 321 aaPredicted RBP12.46□□□□□ -0.41
USP8-212ENST00000560730 ZNF143P52747 638 aaPredicted RBP12.46□□□□□ -0.41
USP8-212ENST00000560730 ADKP55263 362 aaKnown RBP12.46□□□□□ -0.41
USP8-212ENST00000560730 MTA1Q13330 715 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 PTPRNQ16849 979 aa12.46□□□□□ -0.41
USP8-212ENST00000560730 ALFQ53S48 1182 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms