RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 ADRA1BP35368 520 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 SCNN1AP37088 669 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 GPS1Q13098 491 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 RIPK1Q13546 671 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 MRPL58Q14197 206 aaKnown RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 C9orf50Q5SZB4 431 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 SPRED2Q7Z698 418 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 TBC1D1Q86TI0 1168 aaPredicted RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 PALM2Q8IXS6 379 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 CMASQ8NFW8 434 aaPredicted RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 PRCCQ92733 491 aaPredicted RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 CCDC97Q96F63 343 aaPredicted RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 ERP44Q9BS26 406 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 TRIM4Q9C037 500 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 FAM114A2Q9NRY5 505 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 MARCH2Q9P0N8 246 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 AFF4Q9UHB7 1163 aaKnown RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 ATP6V1G1O75348 118 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 SEC24AO95486 1093 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 KRT15P19012 456 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 CCR1P32246 355 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 EPHB3P54753 998 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 BASP1P80723 227 aaKnown RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 SLMAPQ14BN4 828 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 CCNG2Q16589 344 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 ZNF697Q5TEC3 545 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 ZNF572Q7Z3I7 529 aaPredicted RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 DDX53Q86TM3 631 aaKnown RBP9.87□□□□□ -0.83
RTL1-201ENST00000534062 ARHGAP18Q8N392 663 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 IRGQQ8WZA9 623 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 CAVIN3Q969G5 261 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 ATP6V1G3Q96LB4 118 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 SLC9A7Q96T83 725 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 CCSER2Q9H7U1 834 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 NKIRAS1Q9NYS0 192 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 TRPM5Q9NZQ8 1165 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 OR12D3Q9UGF7 316 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 YIPF1Q9Y548 306 aa9.87□□□□□ -0.83
RTL1-201ENST00000534062 GOLGA8MH3BSY2 632 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 NDC80O14777 642 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 KCNN4O15554 427 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 CA3P07451 260 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 CNPP09543 421 aaKnown RBP9.86□□□□□ -0.83
RTL1-201ENST00000534062 TBX4P57082 545 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 DSG1Q02413 1049 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 AP1B1Q10567 949 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ANKRD20A2Q5SQ80 823 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ANKRD20A1Q5TYW2 823 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ANKRD20A3Q5VUR7 823 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 EMBQ6PCB8 327 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 TRIM42Q8IWZ5 723 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 CACNA2D3Q8IZS8 1091 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 POF1BQ8WVV4 589 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 BHMTQ93088 406 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 SLC2A13Q96QE2 648 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 PNPLA8Q9NP80 782 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 SLC12A6Q9UHW9 1150 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ATP8A1Q9Y2Q0 1164 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 FAM187AA6NFU0 413 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ATP5DP30049 168 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 MAGEA11P43364 429 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 NRLP54845 237 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ITKQ08881 620 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 SMARCB1Q12824 385 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 MYBPC3Q14896 1274 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 FAM109BQ6ICB4 259 aaPredicted RBP9.86□□□□□ -0.83
RTL1-201ENST00000534062 SCD5Q86SK9 330 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 BBOF1Q8ND07 529 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 PCDH19Q8TAB3 1148 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 CELF6Q96J87 481 aaKnown RBP9.86□□□□□ -0.83
RTL1-201ENST00000534062 CSPG4P5Q96PW8 444 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 CEP41Q9BYV8 373 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 MFHAS1Q9Y4C4 1052 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ASB3Q9Y575 518 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 TANC1Q9C0D5 1861 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ADH1AP07327 375 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ATF6P18850 670 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 L1CAMP32004 1257 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 GBE1Q04446 702 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 SF3A3Q12874 501 aaKnown RBP eCLIP9.86□□□□□ -0.83
RTL1-201ENST00000534062 CUL3Q13618 768 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 SLC8B1Q6J4K2 584 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 BBS12Q6ZW61 710 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 ELMOD1Q8N336 334 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 SERPINB11Q96P15 392 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 FMO2Q99518 471 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 RRN3Q9NYV6 651 aa9.86□□□□□ -0.83
RTL1-201ENST00000534062 C5orf60A6NFR6 353 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 SRRM3A6NNA2 597 aaPredicted RBP9.85□□□□□ -0.83
RTL1-201ENST00000534062 A8MUI8 341 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 TNFRSF10BO14763 440 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 PER2O15055 1255 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 LIASO43766 372 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 CSH1P0DML2 217 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 CSH2P0DML3 217 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 MYL4P12829 197 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 ALADP13716 330 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 CD151P48509 253 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 P3H1Q32P28 736 aa9.85□□□□□ -0.83
RTL1-201ENST00000534062 HP1BP3Q5SSJ5 553 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms