RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 WDR27A2RRH5 827 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 TSPY2A6NKD2 308 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 ZNF197O14709 1029 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 NMT2O60551 498 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 C8BP07358 591 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 MED14OSP0DP75 135 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 SNHG28P0DPA3 235 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 TOP1P11387 765 aaKnown RBP7.66□□□□□ -1.18
NEDD8-203ENST00000524927 PFKLP17858 780 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 VIPR2P41587 438 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 MC3RP41968 323 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 MRPS9P82933 396 aaKnown RBP7.66□□□□□ -1.18
NEDD8-203ENST00000524927 DMC1Q14565 340 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 SKIDA1Q1XH10 827 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 USP41Q3LFD5 358 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 TOR2AQ5JU69 321 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 ERICH1Q86X53 443 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 MYO1HQ8N1T3 1032 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 ZNF248Q8NDW4 579 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 SETD7Q8WTS6 366 aaKnown RBP7.66□□□□□ -1.18
NEDD8-203ENST00000524927 CNOT6LQ96LI5 555 aaKnown RBP7.66□□□□□ -1.18
NEDD8-203ENST00000524927 EPB41L4BQ9H329 900 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 AZI2Q9H6S1 392 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 POLR3BQ9NW08 1133 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-203ENST00000524927 GALNT8Q9NY28 637 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 PHLPP2Q6ZVD8 1323 aa7.66□□□□□ -1.18
NEDD8-203ENST00000524927 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 HEPACAM2A8MVW5 462 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PCDHGA12O60330 932 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 ZNF623O75123 536 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 ABLIM3O94929 683 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 MPIG6BO95866 241 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 LPLP06858 475 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 MYH7P12883 1935 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PTPN2P17706 415 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 HNF1BP35680 557 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 GLRBP48167 497 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 TDO2P48775 406 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 SRSF2Q01130 221 aaKnown RBP7.65□□□□□ -1.18
NEDD8-203ENST00000524927 MYBPC3Q14896 1274 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 ODF1Q14990 250 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PTPAQ15257 358 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.65□□□□□ -1.18
NEDD8-203ENST00000524927 TBC1D25Q3MII6 688 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 GPATCH4Q5T3I0 446 aaKnown RBP7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PLPPR4Q7Z2D5 763 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 HAUS6Q7Z4H7 955 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 TSTD1Q8NFU3 115 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 OLIG1Q8TAK6 271 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 SMARCC2Q8TAQ2 1214 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 SPATA20Q8TB22 786 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 LPPQ93052 612 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PCYT2Q99447 389 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 ATXN2Q99700 1313 aaKnown RBP7.65□□□□□ -1.18
NEDD8-203ENST00000524927 CLSTN3Q9BQT9 956 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 AMNQ9BXJ7 453 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 TPSD1Q9BZJ3 242 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 DLL4Q9NR61 685 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 ARHGAP20Q9P2F6 1191 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 ANKRD6Q9Y2G4 727 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PRG3Q9Y2Y8 225 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PCDHGA9Q9Y5G4 932 aaKnown RBP7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PCDHGA8Q9Y5G5 932 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PCDHGA7Q9Y5G6 932 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PCDHGA6Q9Y5G7 932 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 PCDHGA3Q9Y5H0 932 aa7.65□□□□□ -1.18
NEDD8-203ENST00000524927 CRYBG3Q68DQ2 2970 aa7.65□□□□□ -1.19
NEDD8-203ENST00000524927 ANKHD1Q8IWZ3 2542 aaKnown RBP7.64□□□□□ -1.19
NEDD8-203ENST00000524927 COL1A2P08123 1366 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 SURF6O75683 361 aaKnown RBP7.64□□□□□ -1.19
NEDD8-203ENST00000524927 PF4V1P10720 104 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 HOXA5P20719 270 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 SLC26A2P50443 739 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 KRT85P78386 507 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 FBXO43Q4G163 708 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 ARHGAP29Q52LW3 1261 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 STK32CQ86UX6 486 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 CPA6Q8N4T0 437 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 EXD3Q8N9H8 876 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 MOCOSQ96EN8 888 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 RAX2Q96IS3 184 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 B3GALT6Q96L58 329 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 C8orf48Q96LL4 319 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 FNBP1Q96RU3 617 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 TMEM47Q9BQJ4 181 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 CNTD2Q9H8S5 307 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 PRDM16Q9HAZ2 1276 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 PCDH18Q9HCL0 1135 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 GTSE1Q9NYZ3 720 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 GIT1Q9Y2X7 761 aa7.64□□□□□ -1.19
NEDD8-203ENST00000524927 TRDMT1O14717 391 aaKnown RBP7.63□□□□□ -1.19
NEDD8-203ENST00000524927 MAFGO15525 162 aa7.63□□□□□ -1.19
NEDD8-203ENST00000524927 RFPL1O75677 317 aa7.63□□□□□ -1.19
NEDD8-203ENST00000524927 IL33O95760 270 aa7.63□□□□□ -1.19
NEDD8-203ENST00000524927 VTNP04004 478 aa7.63□□□□□ -1.19
NEDD8-203ENST00000524927 GNAI2P04899 355 aa7.63□□□□□ -1.19
NEDD8-203ENST00000524927 ZNF883P0CG24 379 aa7.63□□□□□ -1.19
NEDD8-203ENST00000524927 SFTPCP11686 197 aa7.63□□□□□ -1.19
NEDD8-203ENST00000524927 MTHFD2P13995 350 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms