RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 HIC2Q96JB3 615 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 PPP1R9BQ96SB3 815 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 TRMOQ9BU70 441 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 CDK19Q9BWU1 502 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 FAM234AQ9H0X4 552 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 CHST8Q9H2A9 424 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 AASDHPPTQ9NRN7 309 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 CNNM1Q9NRU3 951 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 POT1Q9NUX5 634 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 STK26Q9P289 416 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 NRXN2Q9P2S2 1712 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 PGAP2Q9UHJ9 254 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 PCDHA12Q9UN75 941 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 HS3ST3B1Q9Y662 390 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 TAF1LQ8IZX4 1826 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 DLEC1Q9Y238 1755 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 UNC80Q8N2C7 3258 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 EVC2Q86UK5 1308 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 USP42Q9H9J4 1324 aaKnown RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 CENPJQ9HC77 1338 aaPredicted RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 A0A087WZ62 844 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 TRBV5-3A0A0A0MS03 114 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 SLC22A23A1A5C7 686 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 ISM1B1AKI9 464 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 ERVV-2B6SEH9 535 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 FAM227AF5H4B4 570 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 PSMD9O00233 223 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 TBC1D4O60343 1298 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 TULP3O75386 442 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 PLAUP00749 431 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 HSP90AB1P08238 724 aaKnown RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 TXNP10599 105 aaKnown RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 GYS1P13807 737 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 BTF3P20290 206 aaKnown RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 SLC7A1P30825 629 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 PRKAR1BP31321 381 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 ARRB2P32121 409 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 PGDP52209 483 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 SUMO3P55854 103 aaPredicted RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 FKBP1BP68106 108 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 FMO1Q01740 532 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 DNASE1L3Q13609 305 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 ARHGEF7Q14155 803 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 SEMA3AQ14563 771 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 CLCA4Q14CN2 919 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 PTPROQ16827 1216 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 INSCQ1MX18 579 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 SLC9C1Q4G0N8 1177 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 C3orf38Q5JPI3 329 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 CACHD1Q5VU97 1274 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 ANO7Q6IWH7 933 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 ZNF549Q6P9A3 640 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 VSTM1Q6UX27 236 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 COLCA1Q6ZS62 124 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 USP50Q70EL3 339 aaPredicted RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 CTU1Q7Z7A3 348 aaKnown RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 SESTD1Q86VW0 696 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 RAVER1Q8IY67 606 aaKnown RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 GPC2Q8N158 579 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.03□□□□□ -2.08
CD44-212ENST00000524922 MSLNLQ96KJ4 702 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 FCRL5Q96RD9 977 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 PSMD1Q99460 953 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 HIPK2Q9H2X6 1198 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 TAF1DQ9H5J8 278 aaPredicted RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 SAP30LQ9HAJ7 183 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 MLXIPQ9HAP2 919 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 MSRB1Q9NZV6 116 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 ZNF180Q9UJW8 692 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 SLC27A6Q9Y2P4 619 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 PAXBP1Q9Y5B6 917 aa2.03□□□□□ -2.08
CD44-212ENST00000524922 TRIP12Q14669 1992 aaPredicted RBP2.03□□□□□ -2.08
CD44-212ENST00000524922 MON2Q7Z3U7 1717 aa2.03□□□□□ -2.09
CD44-212ENST00000524922 DOT1LQ8TEK3 1739 aa2.03□□□□□ -2.09
CD44-212ENST00000524922 SNED1Q8TER0 1413 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 FLT4P35916 1363 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 IBTKQ9P2D0 1353 aaPredicted RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 CHD8Q9HCK8 2581 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 IGLV5-39A0A0G2JS06 123 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 E2F8A0AVK6 867 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 CAPN8A6NHC0 703 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 H3BNX3 289 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 SLC28A2O43868 658 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 RNF8O76064 485 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 RASAL1O95294 804 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 CD19P15391 556 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 DPEP1P16444 411 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 ADRA1DP25100 572 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 ACVR2AP27037 513 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 TM4SF1P30408 202 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 GALNSP34059 522 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 CPT1AP50416 773 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 RPS16P62249 146 aaKnown RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 GALEQ14376 348 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 KCNAB1Q14722 419 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 KPNB1Q14974 876 aaKnown RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 CNN3Q15417 329 aaKnown RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 CNGA2Q16280 664 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 AASDHQ4L235 1098 aaPredicted RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 PLAG1Q6DJT9 500 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms