RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 PRKCZQ05513 592 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 ERV3-1Q14264 604 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 RRS1Q15050 365 aaKnown RBP4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 C4orf46Q504U0 113 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 ARMC9Q7Z3E5 817 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 LIX1LQ8IVB5 337 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 SIRT6Q8N6T7 355 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 SMRP1Q8NCR6 262 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 ZKSCAN4Q969J2 545 aaPredicted RBP4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 CAMK1GQ96NX5 476 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 BRINP2Q9C0B6 783 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 SLC12A5Q9H2X9 1139 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 TRMT13Q9NUP7 481 aaKnown RBP4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 GAR1Q9NY12 217 aaKnown RBP4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 HEY2Q9UBP5 337 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 IP6K2Q9UHH9 426 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 TMX2Q9Y320 296 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 RTL1A6NKG5 1358 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 TTC3P53804 2025 aa4.62□□□□□ -1.67
NSMCE2-211ENST00000523549 ABCA12Q86UK0 2595 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 UBR2Q8IWV8 1755 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 A0A088AWK7 358 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 ERVV-2B6SEH9 535 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 PMPCBO75439 489 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 PF4V1P10720 104 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 ALADP13716 330 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 ATF7P17544 494 aaPredicted RBP4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 SCP2P22307 547 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 GKP32189 559 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 RAB1AP62820 205 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 CFHR1Q03591 330 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 SEC23BQ15437 767 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 GRAMD1CQ8IYS0 662 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 LINC01465Q8N7H1 131 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 OSR1Q8TAX0 266 aaPredicted RBP4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 ATOH1Q92858 354 aaPredicted RBP4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 TIFAQ96CG3 184 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 HOOK2Q96ED9 719 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 HNRNPABQ99729 332 aaKnown RBP4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 ARMT1Q9H993 441 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 CNNM1Q9NRU3 951 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 CEP295Q9C0D2 2601 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 CENPJQ9HC77 1338 aaPredicted RBP4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 CFAP46Q8IYW2 2715 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 ITPR1Q14643 2758 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 PIEZO2Q9H5I5 2752 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 LOC400499M0QZD8 3231 aa4.61□□□□□ -1.67
NSMCE2-211ENST00000523549 TEX15Q9BXT5 2789 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 A0A087WWL8 130 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 FAM90A8PA6NJQ4 464 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 SMAD6O43541 496 aaKnown RBP4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 GCATO75600 419 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 OFD1O75665 1012 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 FAM90A13PP0C7W8 464 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 FAM90A24PP0C7X0 464 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 U2AF1L5P0DN76 240 aaPredicted RBP4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 XRCC6P12956 609 aaKnown RBP eCLIP4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 APEHP13798 732 aaKnown RBP4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 NF2P35240 595 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 U2AF1Q01081 240 aaKnown RBP eCLIP4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 SATB1Q01826 763 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 ZNF91Q05481 1191 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 ZNF267Q14586 743 aaPredicted RBP4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 BRI3BPQ8WY22 251 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 C17orf80Q9BSJ5 609 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 AASDHPPTQ9NRN7 309 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 POT1Q9NUX5 634 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 TMEM184CQ9NVA4 438 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 PIH1D1Q9NWS0 290 aaKnown RBP4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 PI4KBQ9UBF8 816 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 CPA4Q9UI42 421 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 RTL9Q8NET4 1388 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 ABCC12Q96J65 1359 aa4.6□□□□□ -1.67
NSMCE2-211ENST00000523549 DCXO43602 365 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 HTR6P50406 440 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 ARFIP2P53365 341 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 LMAN2Q12907 356 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 RLFQ13129 1914 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 FGL2Q14314 439 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 PTPROQ16827 1216 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 MGAT5BQ3V5L5 792 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 HSP90AB2PQ58FF8 381 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 AWAT1Q58HT5 328 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 IFIT1BQ5T764 474 aaKnown RBP4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 RBMXL3Q8N7X1 1067 aaKnown RBP4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 ACRBPQ8NEB7 543 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 ZNF548Q8NEK5 533 aaPredicted RBP4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 DBNDD1Q9H9R9 158 aa4.59□□□□□ -1.67
NSMCE2-211ENST00000523549 ECM29Q5VYK3 1845 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 COL4A1P02462 1669 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 EDC4Q6P2E9 1401 aaKnown RBP4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 IGSF10Q6WRI0 2623 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 M0R3H8 397 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 MYO1CO00159 1063 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 CES2O00748 559 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 CRYABP02511 175 aaKnown RBP4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 CTSAP10619 480 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 PSG1P11464 419 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms