RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 AEBP2Q6ZN18 517 aaPredicted RBP28.89■■■□□ 2.22
NSMCE2-211ENST00000523549 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
NSMCE2-211ENST00000523549 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
NSMCE2-211ENST00000523549 PHF23Q9BUL5 403 aaPredicted RBP24.29■■□□□ 1.48
NSMCE2-211ENST00000523549 FOXD1Q16676 465 aa22.93■■□□□ 1.26
NSMCE2-211ENST00000523549 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
NSMCE2-211ENST00000523549 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
NSMCE2-211ENST00000523549 ADRA2BP18089 450 aa21.42■■□□□ 1.02
NSMCE2-211ENST00000523549 MSH5O43196 834 aa21.38■■□□□ 1.01
NSMCE2-211ENST00000523549 PIAS4Q8N2W9 510 aaPredicted RBP21.37■■□□□ 1.01
NSMCE2-211ENST00000523549 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
NSMCE2-211ENST00000523549 MAPK8IP2Q13387 824 aaPredicted RBP19.67■□□□□ 0.74
NSMCE2-211ENST00000523549 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
NSMCE2-211ENST00000523549 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
NSMCE2-211ENST00000523549 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
NSMCE2-211ENST00000523549 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
NSMCE2-211ENST00000523549 HOXD11P31277 338 aaPredicted RBP18.87■□□□□ 0.61
NSMCE2-211ENST00000523549 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
NSMCE2-211ENST00000523549 DCAF8L1A6NGE4 600 aa18.59■□□□□ 0.57
NSMCE2-211ENST00000523549 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
NSMCE2-211ENST00000523549 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
NSMCE2-211ENST00000523549 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
NSMCE2-211ENST00000523549 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
NSMCE2-211ENST00000523549 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
NSMCE2-211ENST00000523549 KCNA4P22459 653 aa18.02■□□□□ 0.48
NSMCE2-211ENST00000523549 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
NSMCE2-211ENST00000523549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
NSMCE2-211ENST00000523549 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
NSMCE2-211ENST00000523549 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
NSMCE2-211ENST00000523549 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
NSMCE2-211ENST00000523549 CAPN15O75808 1086 aa17.18■□□□□ 0.34
NSMCE2-211ENST00000523549 DSG3P32926 999 aa17.16■□□□□ 0.34
NSMCE2-211ENST00000523549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
NSMCE2-211ENST00000523549 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
NSMCE2-211ENST00000523549 APLP2Q06481 763 aa17.01■□□□□ 0.31
NSMCE2-211ENST00000523549 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
NSMCE2-211ENST00000523549 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
NSMCE2-211ENST00000523549 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
NSMCE2-211ENST00000523549 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
NSMCE2-211ENST00000523549 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
NSMCE2-211ENST00000523549 ABCB7O75027 752 aa16.8■□□□□ 0.28
NSMCE2-211ENST00000523549 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
NSMCE2-211ENST00000523549 ZBTB22O15209 634 aa16.59■□□□□ 0.25
NSMCE2-211ENST00000523549 POLA2Q14181 598 aa16.55■□□□□ 0.24
NSMCE2-211ENST00000523549 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
NSMCE2-211ENST00000523549 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
NSMCE2-211ENST00000523549 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
NSMCE2-211ENST00000523549 POTEHQ6S545 545 aa16.27■□□□□ 0.2
NSMCE2-211ENST00000523549 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
NSMCE2-211ENST00000523549 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
NSMCE2-211ENST00000523549 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
NSMCE2-211ENST00000523549 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
NSMCE2-211ENST00000523549 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
NSMCE2-211ENST00000523549 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
NSMCE2-211ENST00000523549 FBLN2P98095 1184 aa15.8■□□□□ 0.12
NSMCE2-211ENST00000523549 MKRN4PQ13434 485 aaPredicted RBP15.8■□□□□ 0.12
NSMCE2-211ENST00000523549 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
NSMCE2-211ENST00000523549 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
NSMCE2-211ENST00000523549 SPDYE2Q495Y8 402 aa15.72■□□□□ 0.11
NSMCE2-211ENST00000523549 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
NSMCE2-211ENST00000523549 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
NSMCE2-211ENST00000523549 PIP4P2Q8N4L2 257 aa15.59■□□□□ 0.09
NSMCE2-211ENST00000523549 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
NSMCE2-211ENST00000523549 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
NSMCE2-211ENST00000523549 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
NSMCE2-211ENST00000523549 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
NSMCE2-211ENST00000523549 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
NSMCE2-211ENST00000523549 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
NSMCE2-211ENST00000523549 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
NSMCE2-211ENST00000523549 HAX1O00165 279 aa15.24■□□□□ 0.03
NSMCE2-211ENST00000523549 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
NSMCE2-211ENST00000523549 EVX2Q03828 476 aa15.16■□□□□ 0.02
NSMCE2-211ENST00000523549 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
NSMCE2-211ENST00000523549 CHADLQ6NUI6 762 aa15.08■□□□□ 0
NSMCE2-211ENST00000523549 C19orf67A6NJJ6 358 aa15.04■□□□□ -0
NSMCE2-211ENST00000523549 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
NSMCE2-211ENST00000523549 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
NSMCE2-211ENST00000523549 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
NSMCE2-211ENST00000523549 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
NSMCE2-211ENST00000523549 GABBR2O75899 941 aa14.78□□□□□ -0.04
NSMCE2-211ENST00000523549 PROM2Q8N271 834 aa14.77□□□□□ -0.05
NSMCE2-211ENST00000523549 CD44P16070 742 aaKnown RBP14.74□□□□□ -0.05
NSMCE2-211ENST00000523549 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
NSMCE2-211ENST00000523549 CLCN6P51797 869 aa14.58□□□□□ -0.08
NSMCE2-211ENST00000523549 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
NSMCE2-211ENST00000523549 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
NSMCE2-211ENST00000523549 POTEIP0CG38 1075 aa14.51□□□□□ -0.09
NSMCE2-211ENST00000523549 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
NSMCE2-211ENST00000523549 PAK3O75914 559 aaPredicted RBP14.4□□□□□ -0.1
NSMCE2-211ENST00000523549 GALR2O43603 387 aaPredicted RBP14.37□□□□□ -0.11
NSMCE2-211ENST00000523549 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
NSMCE2-211ENST00000523549 FKBP8Q14318 412 aa14.34□□□□□ -0.11
NSMCE2-211ENST00000523549 LHX8Q68G74 356 aa14.33□□□□□ -0.12
NSMCE2-211ENST00000523549 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
NSMCE2-211ENST00000523549 MIER1Q8N108 512 aa14.32□□□□□ -0.12
NSMCE2-211ENST00000523549 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
NSMCE2-211ENST00000523549 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
NSMCE2-211ENST00000523549 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
NSMCE2-211ENST00000523549 MS4A3Q96HJ5 214 aa14.18□□□□□ -0.14
NSMCE2-211ENST00000523549 RASEFQ8IZ41 740 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms