RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NCF1BA6NI72 391 aaPredicted RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 NCF1CA8MVU1 366 aaPredicted RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 NCF1P14598 390 aaPredicted RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 THPOP40225 353 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 MRPS15P82914 257 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 SLC27A1Q6PCB7 646 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 ILDR2Q71H61 639 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 PTAR1Q7Z6K3 402 aaPredicted RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 EDEM1Q92611 657 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 EBF2Q9HAK2 575 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 LRRC4CQ9HCJ2 640 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 EXOSC4Q9NPD3 245 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 ETNK2Q9NVF9 386 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 BANF1O75531 89 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 ITGB5P18084 799 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 ENPEPQ07075 957 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 RAET1EQ8TD07 263 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 GDPD5Q8WTR4 605 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 PHF21BQ96EK2 531 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 UNKQ9C0B0 810 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 SPON1Q9HCB6 807 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 KCNH4Q9UQ05 1017 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 MYO5AQ9Y4I1 1855 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 MEI4A8MW99 385 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PROCP04070 461 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 CCNB1P14635 433 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 CSE1LP55060 971 aaKnown RBP14.11□□□□□ -0.15
SYNPO-205ENST00000522122 RTP1P59025 263 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 NAB1Q13506 487 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 BLMHQ13867 455 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PLEKHA7Q6IQ23 1121 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ZFYVE28Q9HCC9 887 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 SH3BP1Q9Y3L3 701 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 A0A0B4J269 797 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 A0A1W2PPM1 405 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 KRT36O76013 467 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 UPP2O95045 317 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 FAM58BPP0C7Q3 252 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ZNF286BP0CG31 522 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 SLURP2P0DP57 97 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ME2P23368 584 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ACAT1P24752 427 aaKnown RBP14.11□□□□□ -0.15
SYNPO-205ENST00000522122 CCR1P32246 355 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ZNF157P51786 506 aaPredicted RBP14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ST8SIA6P61647 398 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 RUNX1T1Q06455 604 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 MARC1Q5VT66 337 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PLEKHH3Q7Z736 793 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 KIAA2013Q8IYS2 634 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PIWIL2Q8TC59 973 aaKnown RBP14.11□□□□□ -0.15
SYNPO-205ENST00000522122 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PRKD2Q9BZL6 878 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 DSEQ9UL01 958 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 COL18A1P39060 1754 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PDE5AO76074 875 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 VAPBO95292 243 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 CRTAMO95727 393 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 MLH1P40692 756 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PPP3CCP48454 512 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 UGCGQ16739 394 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 GSTA3Q16772 222 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ATP6AP1LQ52LC2 224 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 C16orf46Q6P387 395 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 BBS12Q6ZW61 710 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 DDHD1Q8NEL9 900 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 SLC2A14Q8TDB8 520 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 NMRAL1Q9HBL8 299 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PDGFCQ9NRA1 345 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 SORCS3Q9UPU3 1222 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 ALDH1A3P47895 512 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 R3HDM1Q15032 1099 aaKnown RBP14.11□□□□□ -0.15
SYNPO-205ENST00000522122 GRIK4Q16099 956 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 C15orf59Q2T9L4 293 aaPredicted RBP14.11□□□□□ -0.15
SYNPO-205ENST00000522122 CCDC81Q6ZN84 652 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 TTC30BQ8N4P2 665 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PRDM5Q9NQX1 630 aaPredicted RBP14.11□□□□□ -0.15
SYNPO-205ENST00000522122 PPP2R3BQ9Y5P8 575 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 RAD54BQ9Y620 910 aa14.11□□□□□ -0.15
SYNPO-205ENST00000522122 FCGR1AP12314 374 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 CRABP2P29373 138 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 RPL7AP62424 266 aaKnown RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 EFEMP1Q12805 493 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 SHROOM1Q2M3G4 852 aaPredicted RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 SNX32Q86XE0 403 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 RNF148Q8N7C7 305 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 C10orf71Q711Q0 1435 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 KRT8P05787 483 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 DNAJB2P25686 324 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 CDH18Q13634 790 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 NFE2Q16621 373 aaPredicted RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 TMCO5AQ8N6Q1 288 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 CDRT15Q96T59 188 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 VAT1Q99536 393 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 NMRK1Q9NWW6 199 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 CROTQ9UKG9 612 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 ATP11BQ9Y2G3 1177 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms