RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 Q71RC1 249 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 CDH24Q86UP0 819 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 DDX42Q86XP3 938 aaKnown RBP eCLIP7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 PDCL2Q8N4E4 241 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 Q8NA96 180 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 MCPH1Q8NEM0 835 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 OR2T34Q8NGX1 318 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 APOBEC4Q8WW27 367 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 SCARF2Q96GP6 870 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 PPP1R13BQ96KQ4 1090 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 SPATA17Q96L03 361 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 TCEANC2Q96MN5 208 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 NOX5Q96PH1 765 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 TCHPQ9BT92 498 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 CCSER1Q9C0I3 900 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 DLL4Q9NR61 685 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 KLHL11Q9NVR0 708 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 FBXL12Q9NXK8 326 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 LUZP4Q9P127 313 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 WDR35Q9P2L0 1181 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 DSEQ9UL01 958 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 L1RE1Q9UN81 338 aa7.13□□□□□ -1.27
CTNNA1-216ENST00000519489 PRRC2AP48634 2157 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 A0A1W2PQM1 296 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 NPC1O15118 1278 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 MID1O15344 667 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 CNTN5O94779 1100 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 TBX18O95935 607 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 DNTTP04053 509 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 BDNFP23560 247 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 MAGEA11P43364 429 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 NPTX2P47972 431 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 METAP1P53582 386 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 MARSP56192 900 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 NLRP5P59047 1200 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 ZBTB16Q05516 673 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 LTBQ06643 244 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 CDC20Q12834 499 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 ZRSR2Q15696 482 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 FAM171BQ6P995 826 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 RIPOR1Q6ZS17 1223 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 DENND5BQ6ZUT9 1274 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 IQCHQ86VS3 1027 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 METTL23Q86XA0 190 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 DAW1Q8N136 415 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 SLC22A18ASQ8N1D0 253 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 AADATQ8N5Z0 425 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 FAM84AQ96KN4 292 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 CATSPER2Q96P56 530 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 CCDC3Q9BQI4 270 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 ESYT1Q9BSJ8 1104 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 SRRTQ9BXP5 876 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 MRPL4Q9BYD3 311 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 PLEKHA5Q9HAU0 1116 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 USP29Q9HBJ7 922 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 CRTAC1Q9NQ79 661 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 LATS2Q9NRM7 1088 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 RRN3Q9NYV6 651 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 CHORDC1Q9UHD1 332 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 KLF15Q9UIH9 416 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 RPH3AQ9Y2J0 694 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 KCNMB2Q9Y691 235 aa7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 DNMT3AQ9Y6K1 912 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 ZNF106Q9H2Y7 1883 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-216ENST00000519489 SCN8AQ9UQD0 1980 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 GOLGA8AA7E2F4 631 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 GOLGA8BA8MQT2 603 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 ZNF891A8MT65 544 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 JAK2O60674 1132 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 MED24O75448 989 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 ITGB3P05106 788 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 CLTAP09496 248 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 JMJD7P0C870 316 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 CCL4P13236 92 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 MAT2AP31153 395 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 MAPK10P53779 464 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 HDAC4P56524 1084 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 TSPY1Q01534 308 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 PPP2R3AQ06190 1150 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 MCL1Q07820 350 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 EIF3IQ13347 325 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 NOLC1Q14978 699 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 ECM1Q16610 540 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 EARS2Q5JPH6 523 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 PIK3AP1Q6ZUJ8 805 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 USP30Q70CQ3 517 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 APBB1IPQ7Z5R6 666 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 SPATA2LQ8IUW3 424 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 SLC35F3Q8IY50 421 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 CCDC13Q8IYE1 715 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 TPCN2Q8NHX9 752 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 BICD2Q8TD16 824 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 MYLPFQ96A32 169 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 SLC45A3Q96JT2 553 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 DRC1Q96MC2 740 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 SMR3AQ99954 134 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 ACBD6Q9BR61 282 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 CIPCQ9C0C6 399 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 RSPH9Q9H1X1 276 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 SEMA6CQ9H3T2 930 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms