RNA–Protein interactions for RNA: ENST00000505885.1

SRPK1-207, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-207ENST00000505885 PAF1Q8N7H5 531 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 TEX19Q8NA77 164 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 STT3BQ8TCJ2 826 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 WIPF2Q8TF74 440 aaPredicted RBP3.83□□□□□ -1.8
SRPK1-207ENST00000505885 GRAMD1AQ96CP6 724 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 ZFYVE19Q96K21 471 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 TRMOQ9BU70 441 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.83□□□□□ -1.8
SRPK1-207ENST00000505885 PCDHAC1Q9H158 963 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 SAYSD1Q9NPB0 183 aa3.83□□□□□ -1.8
SRPK1-207ENST00000505885 ZMYND8Q9ULU4 1186 aaPredicted RBP3.83□□□□□ -1.8
SRPK1-207ENST00000505885 CACNA1IQ9P0X4 2223 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 CCDC187A0A096LP49 1063 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 A0A1B0GVC2 190 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 FAM90A10PA6NDY2 464 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 CD8B2A6NJW9 211 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 TTC34A8MYJ7 566 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 B4DGG1 531 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 VIPP01282 170 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 CRYABP02511 175 aaKnown RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 CST5P28325 142 aaPredicted RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 DUSP1P28562 367 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 TKTP29401 623 aaKnown RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 GSTM5P46439 218 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 MCM2P49736 904 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 SEMA3BQ13214 749 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 LEXMQ3ZCV2 418 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 TRIM60Q495X7 471 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 FAM90A2PQ658T7 463 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 FAM57BQ71RH2 274 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 ADGRF4Q8IZF3 695 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 ATG16L2Q8NAA4 619 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 CELF1Q92879 486 aaKnown RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 USP13Q92995 863 aaPredicted RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 EIF3CQ99613 913 aaKnown RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 RNF26Q9BY78 433 aaPredicted RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 FAM234AQ9H0X4 552 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 MOV10Q9HCE1 1003 aaKnown RBP3.82□□□□□ -1.8
SRPK1-207ENST00000505885 ZBTB40Q9NUA8 1239 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 LRFN1Q9P244 771 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 IGSF9Q9P2J2 1179 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 COG5Q9UP83 839 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 PCDHGB3Q9Y5G1 929 aa3.82□□□□□ -1.8
SRPK1-207ENST00000505885 LAMC3Q9Y6N6 1575 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 TTBK1Q5TCY1 1321 aaPredicted RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 UGDHO60701 494 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 TULP3O75386 442 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 WDHD1O75717 1129 aaPredicted RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 MATN1P21941 496 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 SLC12A2P55011 1212 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 KRTAP10-9P60411 292 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 TBX2Q13207 712 aaPredicted RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 TWIST1Q15672 202 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 MAPRE1Q15691 268 aaKnown RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 ADCK5Q3MIX3 580 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 INTS11Q5TA45 600 aaKnown RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 ATPAF1Q5TC12 328 aaPredicted RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 CCDC144NLQ6NUI1 221 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 KYAT3Q6YP21 454 aaKnown RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 UBE2Q1Q7Z7E8 422 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 TTC30AQ86WT1 665 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 ZDHHC17Q8IUH5 632 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 RASGRP3Q8IV61 690 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 UEVLDQ8IX04 471 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 WDR60Q8WVS4 1066 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 C18orf8Q96DM3 657 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 ZSCAN31Q96LW9 406 aaPredicted RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 PRPF18Q99633 342 aaKnown RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 SENP7Q9BQF6 1050 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 C9orf78Q9NZ63 289 aaPredicted RBP3.81□□□□□ -1.8
SRPK1-207ENST00000505885 KIF17Q9P2E2 1029 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 GRHPRQ9UBQ7 328 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 SLC13A4Q9UKG4 626 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 LZTS1Q9Y250 596 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 TMEM98Q9Y2Y6 226 aa3.81□□□□□ -1.8
SRPK1-207ENST00000505885 A0A1W2PPC1 479 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 EFCAB8A8MWE9 144 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 F8W810 466 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 PIP5K1BO14986 540 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 USP12O75317 370 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 TOMM40O96008 361 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 ALPLP05186 524 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 SRGAP2BP0DMP2 458 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 HOXB6P17509 224 aaKnown RBP3.8□□□□□ -1.8
SRPK1-207ENST00000505885 TNFRSF1BP20333 461 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 SLC8A1P32418 973 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 HOXD12P35452 270 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 STAT6P42226 847 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 AGTR2P50052 363 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 HTR6P50406 440 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 ALDH18A1P54886 795 aaKnown RBP3.8□□□□□ -1.8
SRPK1-207ENST00000505885 AP2B1P63010 937 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 TLE2Q04725 743 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 POSTNQ15063 836 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 GGT6Q6P531 493 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 KLHL17Q6TDP4 642 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 DHRS13Q6UX07 377 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 PIK3AP1Q6ZUJ8 805 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 KRT27Q7Z3Y8 459 aa3.8□□□□□ -1.8
SRPK1-207ENST00000505885 RFX6Q8HWS3 928 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms