RNA–Protein interactions for RNA: ENST00000505885.1

SRPK1-207, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-207ENST00000505885 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
SRPK1-207ENST00000505885 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
SRPK1-207ENST00000505885 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
SRPK1-207ENST00000505885 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
SRPK1-207ENST00000505885 FOXD1Q16676 465 aa16.45■□□□□ 0.22
SRPK1-207ENST00000505885 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
SRPK1-207ENST00000505885 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
SRPK1-207ENST00000505885 ADRA2BP18089 450 aa15.65■□□□□ 0.1
SRPK1-207ENST00000505885 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
SRPK1-207ENST00000505885 MSH5O43196 834 aa15.23■□□□□ 0.03
SRPK1-207ENST00000505885 POTEDQ86YR6 584 aa14.29□□□□□ -0.12
SRPK1-207ENST00000505885 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
SRPK1-207ENST00000505885 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
SRPK1-207ENST00000505885 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
SRPK1-207ENST00000505885 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
SRPK1-207ENST00000505885 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
SRPK1-207ENST00000505885 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
SRPK1-207ENST00000505885 KCNA4P22459 653 aa13.7□□□□□ -0.22
SRPK1-207ENST00000505885 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
SRPK1-207ENST00000505885 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
SRPK1-207ENST00000505885 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
SRPK1-207ENST00000505885 DCAF8L1A6NGE4 600 aa13.56□□□□□ -0.24
SRPK1-207ENST00000505885 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
SRPK1-207ENST00000505885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.327e-7■□□□□ 9.6
SRPK1-207ENST00000505885 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
SRPK1-207ENST00000505885 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
SRPK1-207ENST00000505885 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
SRPK1-207ENST00000505885 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
SRPK1-207ENST00000505885 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
SRPK1-207ENST00000505885 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
SRPK1-207ENST00000505885 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
SRPK1-207ENST00000505885 ZBTB22O15209 634 aa12.62□□□□□ -0.39
SRPK1-207ENST00000505885 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
SRPK1-207ENST00000505885 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
SRPK1-207ENST00000505885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
SRPK1-207ENST00000505885 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
SRPK1-207ENST00000505885 CAPN15O75808 1086 aa12.54□□□□□ -0.4
SRPK1-207ENST00000505885 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
SRPK1-207ENST00000505885 APLP2Q06481 763 aa12.47□□□□□ -0.41
SRPK1-207ENST00000505885 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
SRPK1-207ENST00000505885 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
SRPK1-207ENST00000505885 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
SRPK1-207ENST00000505885 DSG3P32926 999 aa12.33□□□□□ -0.44
SRPK1-207ENST00000505885 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
SRPK1-207ENST00000505885 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
SRPK1-207ENST00000505885 ABCB7O75027 752 aa12.3□□□□□ -0.44
SRPK1-207ENST00000505885 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
SRPK1-207ENST00000505885 POLA2Q14181 598 aa12.15□□□□□ -0.46
SRPK1-207ENST00000505885 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
SRPK1-207ENST00000505885 FBLN2P98095 1184 aa11.78□□□□□ -0.52
SRPK1-207ENST00000505885 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
SRPK1-207ENST00000505885 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
SRPK1-207ENST00000505885 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
SRPK1-207ENST00000505885 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
SRPK1-207ENST00000505885 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
SRPK1-207ENST00000505885 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
SRPK1-207ENST00000505885 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
SRPK1-207ENST00000505885 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
SRPK1-207ENST00000505885 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
SRPK1-207ENST00000505885 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
SRPK1-207ENST00000505885 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
SRPK1-207ENST00000505885 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
SRPK1-207ENST00000505885 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
SRPK1-207ENST00000505885 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
SRPK1-207ENST00000505885 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
SRPK1-207ENST00000505885 POTEHQ6S545 545 aa11.28□□□□□ -0.6
SRPK1-207ENST00000505885 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
SRPK1-207ENST00000505885 FKBP8Q14318 412 aa11.2□□□□□ -0.62
SRPK1-207ENST00000505885 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
SRPK1-207ENST00000505885 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.63
SRPK1-207ENST00000505885 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
SRPK1-207ENST00000505885 PROM2Q8N271 834 aa11.09□□□□□ -0.63
SRPK1-207ENST00000505885 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
SRPK1-207ENST00000505885 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
SRPK1-207ENST00000505885 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
SRPK1-207ENST00000505885 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
SRPK1-207ENST00000505885 HAX1O00165 279 aa10.9□□□□□ -0.66
SRPK1-207ENST00000505885 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
SRPK1-207ENST00000505885 MIER1Q8N108 512 aa10.82□□□□□ -0.68
SRPK1-207ENST00000505885 FBXO3Q9UK99 471 aa10.8□□□□□ -0.68
SRPK1-207ENST00000505885 EVX2Q03828 476 aa10.79□□□□□ -0.68
SRPK1-207ENST00000505885 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
SRPK1-207ENST00000505885 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
SRPK1-207ENST00000505885 MNX1P50219 401 aaPredicted RBP10.77□□□□□ -0.69
SRPK1-207ENST00000505885 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
SRPK1-207ENST00000505885 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
SRPK1-207ENST00000505885 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
SRPK1-207ENST00000505885 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
SRPK1-207ENST00000505885 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
SRPK1-207ENST00000505885 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
SRPK1-207ENST00000505885 ZBTB47Q9UFB7 747 aaPredicted RBP10.63□□□□□ -0.71
SRPK1-207ENST00000505885 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
SRPK1-207ENST00000505885 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
SRPK1-207ENST00000505885 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
SRPK1-207ENST00000505885 RASEFQ8IZ41 740 aa10.58□□□□□ -0.72
SRPK1-207ENST00000505885 GABBR2O75899 941 aa10.55□□□□□ -0.72
SRPK1-207ENST00000505885 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
SRPK1-207ENST00000505885 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
SRPK1-207ENST00000505885 NUBP1P53384 320 aa10.54□□□□□ -0.72
SRPK1-207ENST00000505885 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms