RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 TCAF2A6NFQ2 919 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.01□□□□□ -0.01
BRCA1-223ENST00000494123 H0Y626 953 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 H3BRJ5 948 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 DAPK3O43293 454 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 DCXO43602 365 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 CACNG3O60359 315 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 SLC34A2O95436 690 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 EPHB2P29323 1055 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 HTR7P34969 479 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 CDH6P55285 790 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 DPYSL2Q16555 572 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 C5orf22Q49AR2 442 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 ATP13A4Q4VNC1 1196 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 C1orf228Q6PIY5 440 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 CIR1Q86X95 450 aaPredicted RBP15.01□□□□□ -0.01
BRCA1-223ENST00000494123 MAP7D3Q8IWC1 876 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 CCAR2Q8N163 923 aaKnown RBP15.01□□□□□ -0.01
BRCA1-223ENST00000494123 TRIM58Q8NG06 486 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 SHDQ96IW2 340 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 KLHL11Q9NVR0 708 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 DDX56Q9NY93 547 aaKnown RBP15.01□□□□□ -0.01
BRCA1-223ENST00000494123 MPP6Q9NZW5 540 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 DEC1Q9P2X7 70 aa15.01□□□□□ -0.01
BRCA1-223ENST00000494123 PPARGC1AQ9UBK2 798 aaKnown RBP15.01□□□□□ -0.01
BRCA1-223ENST00000494123 MIA3Q5JRA6 1907 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 IGLV3-10A0A075B6K4 115 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 DRGXA6NNA5 263 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 MAN2B1O00754 1011 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 TULP3O75386 442 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 CLDN11O75508 207 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 CNTN5O94779 1100 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 LUC7L3O95232 432 aaKnown RBP15□□□□□ -0.01
BRCA1-223ENST00000494123 FTCDO95954 541 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 KRT1P04264 644 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 ALADP13716 330 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 IRAK1P51617 712 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 CDH4P55283 916 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 PRKCQQ04759 706 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 SEMA3BQ13214 749 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 PDK2Q15119 407 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 PREPLQ4J6C6 727 aaPredicted RBP15□□□□□ -0.01
BRCA1-223ENST00000494123 IER5LQ5T953 404 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 MANEALQ5VSG8 457 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 CHST9Q7L1S5 443 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 C12orf40Q86WS4 652 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF683Q8IZ20 524 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 SIX5Q8N196 739 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 CD101Q93033 1021 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 P2RY13Q9BPV8 354 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 CALN1Q9BXU9 219 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 SLC2A11Q9BYW1 496 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 CATSPERBQ9H7T0 1116 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 NCOR1O75376 2440 aa15□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 CCDC66A2RUB6 948 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 LRRD1A4D1F6 860 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 USP27XA6NNY8 438 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 FGF10O15520 208 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 GOT1P17174 413 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 OPRD1P41143 372 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 EIF2DP41214 584 aaKnown RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 SLC6A11P48066 632 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 DGKGP49619 791 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 KDSRQ06136 332 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF177Q13360 481 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 GAB4Q2WGN9 574 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 ALFQ53S48 1182 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 HS1BP3Q53T59 392 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 GRAMD4Q6IC98 578 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 RFX8Q6ZV50 586 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 TFAP2DQ7Z6R9 452 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 NT5DC3Q86UY8 548 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 ETFBKMTQ8IXQ9 262 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 UBL4BQ8N7F7 174 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 FAM3CQ92520 227 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 EDAQ92838 391 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 P2RY11Q96G91 374 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 PNKPQ96T60 521 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 PCDH18Q9HCL0 1135 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 KIAA1549LQ6ZVL6 1849 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 DOCK4Q8N1I0 1966 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 MIF4GDA9UHW6 222 aaKnown RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 KIF5CO60282 957 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 RHOQP17081 205 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 OR1E1P30953 314 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 CTNNA1P35221 906 aaKnown RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 SIGLEC14Q08ET2 396 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 PON2Q15165 354 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF852Q6ZMS4 543 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 NUDT18Q6ZVK8 323 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 CHFRQ96EP1 664 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 ARHGEF4Q9NR80 690 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 CWC15Q9P013 229 aaKnown RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 RCOR3Q9P2K3 495 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-223ENST00000494123 CLEC4EQ9ULY5 219 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 PCDHA3Q9Y5H8 950 aa14.99□□□□□ -0.01
BRCA1-223ENST00000494123 BDP1A6H8Y1 2624 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 KRBA1A5PL33 1030 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 PI4K2BG5E9Z4 385 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms