RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 LTV1Q96GA3 475 aaPredicted RBP4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 CRB3Q9BUF7 120 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 TMEM120AQ9BXJ8 343 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 BRD8Q9H0E9 1235 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 HEY2Q9UBP5 337 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 RAB21Q9UL25 225 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 TRPC5Q9UL62 973 aaPredicted RBP4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 SLC12A4Q9UP95 1085 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 DAAM1Q9Y4D1 1078 aa4.47□□□□□ -1.69
SNRNP27-205ENST00000488986 EFCAB8A8MWE9 144 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 M0QYT0 321 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 SYT5O00445 386 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 PRPF4O43172 522 aaKnown RBP eCLIP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 PPP6R2O75170 966 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 CNTN5O94779 1100 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 RFPL3SP0C7P2 107 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 RBM6P78332 1123 aaKnown RBP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 B4GALNT1Q00973 533 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 MTX1Q13505 466 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 BTBD16Q32M84 506 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 ZNF474Q6S9Z5 364 aaPredicted RBP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 KLHL17Q6TDP4 642 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 RINLQ6ZS11 566 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 CCDC117Q8IWD4 279 aaPredicted RBP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 ATG16L2Q8NAA4 619 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 VCPIP1Q96JH7 1222 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 RTKNQ9BST9 563 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 KATNAL1Q9BW62 490 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 GATA5Q9BWX5 397 aaPredicted RBP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 LIN7CQ9NUP9 197 aaKnown RBP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 HERC5Q9UII4 1024 aaKnown RBP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 CNTN6Q9UQ52 1028 aa4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.46□□□□□ -1.7
SNRNP27-205ENST00000488986 LY6G6EA0A0G2JKS1 128 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 ZC3H11AO75152 810 aaKnown RBP eCLIP4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 TULP3O75386 442 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 NFATC1O95644 943 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 CIITAP33076 1130 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 RPL15P61313 204 aaKnown RBP4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 SRSF1Q07955 248 aaKnown RBP eCLIP4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 BLMHQ13867 455 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 RPS6KA2Q15349 733 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 DLGAP5Q15398 846 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 TWIST1Q15672 202 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 ISM2Q6H9L7 571 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 CYB5R4Q7L1T6 521 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 MEPCEQ7L2J0 689 aaKnown RBP4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 ARL14EPQ8N8R7 260 aaPredicted RBP4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 SLC44A5Q8NCS7 719 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 VPS37AQ8NEZ2 397 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 SPATA3Q8NHX4 192 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 EID2BQ96D98 161 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 RMDN3Q96TC7 470 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 DECR2Q9NUI1 292 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 DACT1Q9NYF0 836 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 TTC3P53804 2025 aa4.45□□□□□ -1.7
SNRNP27-205ENST00000488986 FAM90A10PA6NDY2 464 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 MBD3L5A6NJ08 208 aaPredicted RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 SLC38A8A6NNN8 435 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 H3BNX3 289 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 ACTL6BO94805 426 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 KAT7O95251 611 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 SYF2O95926 243 aaKnown RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 CYP3A4P08684 503 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 ALDOCP09972 364 aaKnown RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 PDIA3P30101 505 aaKnown RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 ALDH7A1P49419 539 aaKnown RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 SHC2P98077 582 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 MORC3Q14149 939 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 TBRG1Q3YBR2 411 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 TRIM60Q495X7 471 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 MANEAQ5SRI9 462 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 KIAA1161Q6NSJ0 714 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 NFRKBQ6P4R8 1299 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 COLCA1Q6ZS62 124 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 PIP4P1Q86T03 277 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 ADGRF3Q8IZF5 1079 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 ZNF548Q8NEK5 533 aaPredicted RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 OR52N4Q8NGI2 321 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 POF1BQ8WVV4 589 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 CPT1BQ92523 772 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 NLRP4Q96MN2 994 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 PIMREGQ9BSJ6 248 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 OSBPL5Q9H0X9 879 aaPredicted RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 ELAC1Q9H777 363 aaKnown RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.44□□□□□ -1.73e-7■■■■■ 96.8
SNRNP27-205ENST00000488986 AGO2Q9UKV8 859 aaKnown RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 TNFSF13BQ9Y275 285 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 SQORQ9Y6N5 450 aa4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 TTBK1Q5TCY1 1321 aaPredicted RBP4.44□□□□□ -1.7
SNRNP27-205ENST00000488986 LMTK3Q96Q04 1460 aa4.43□□□□□ -1.7
SNRNP27-205ENST00000488986 CYP3A7-CYP3A51PA0A087WV96 503 aa4.43□□□□□ -1.7
SNRNP27-205ENST00000488986 TRBV5-3A0A0A0MS03 114 aa4.43□□□□□ -1.7
SNRNP27-205ENST00000488986 KIR2DS5A0A0G2JLQ3 304 aa4.43□□□□□ -1.7
SNRNP27-205ENST00000488986 KIR2DS3K7RE56 304 aa4.43□□□□□ -1.7
SNRNP27-205ENST00000488986 RHODO00212 210 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms