RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 F8VZ95 297 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 FOXN3O00409 490 aaPredicted RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 HCRTO43612 131 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ATP2C2O75185 946 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 UBOX5O94941 541 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 FGF19O95750 216 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 POU2F2P09086 479 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 SPATA31D3P0C874 917 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CSH1P0DML2 217 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CSH2P0DML3 217 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 HAPLN1P10915 354 aaPredicted RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CCDC130P13994 396 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ACO1P21399 889 aaKnown RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 BDNFP23560 247 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CCNFP41002 786 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 MTHFRP42898 656 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 BCAT1P54687 386 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 SNX16P57768 344 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 TUBB4BP68371 445 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 SLC7A5Q01650 507 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 APBA1Q02410 837 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ITIH3Q06033 890 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 BST2Q10589 180 aaKnown RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 TWF1Q12792 350 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 DUSP4Q13115 394 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ADAM15Q13444 863 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ASIC2Q16515 512 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 MEA1Q16626 185 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 AAK1Q2M2I8 961 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 GOLGA7BQ2TAP0 167 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 RARS2Q5T160 578 aaKnown RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 SFMBT2Q5VUG0 894 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ARHGAP17Q68EM7 881 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 KIAA1211LQ6NV74 962 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 MMS22LQ6ZRQ5 1243 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 SPATA31D4Q6ZUB0 917 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ARMCX6Q7L4S7 300 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 LRRTM3Q86VH5 581 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 VPS36Q86VN1 386 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ZNF677Q86XU0 584 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 VSTM4Q8IW00 320 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 UBR7Q8N806 425 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ATAD1Q8NBU5 361 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 LEMD2Q8NC56 503 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 MSANTD4Q8NCY6 345 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CMASQ8NFW8 434 aaPredicted RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 BAHD1Q8TBE0 780 aaPredicted RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 SLC2A14Q8TDB8 520 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 KLHL6Q8WZ60 621 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 KAT5Q92993 513 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 C8orf48Q96LL4 319 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 NOX5Q96PH1 765 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 GCNAQ96QF7 691 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 TWNKQ96RR1 684 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 PKMYT1Q99640 499 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 HNRNPABQ99729 332 aaKnown RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 NAA15Q9BXJ9 866 aaKnown RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 FOXQ1Q9C009 403 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 MIS12Q9H081 205 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 ACSS3Q9H6R3 686 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 UBE2ZQ9H832 354 aaPredicted RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 DMAP1Q9NPF5 467 aaPredicted RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CD207Q9UJ71 328 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 PCOLCE2Q9UKZ9 415 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CNTN6Q9UQ52 1028 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 LUC7L2Q9Y383 392 aaKnown RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 YIPF1Q9Y548 306 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 INSL5Q9Y5Q6 135 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 RANBP2P49792 3224 aaKnown RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CCDC189A1A4V9 331 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 LRRC53A6NM62 1247 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 M0QYV0 167 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 CLDN5O00501 218 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 ZNF197O14709 1029 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 CCL16O15467 120 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 LINC01565O15544 149 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 GFPT2O94808 682 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 NOL4O94818 638 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 LRIG2O94898 1065 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 RTN3O95197 1032 aaPredicted RBP6.48□□□□□ -1.37
SF3B1-209ENST00000479532 SEC24AO95486 1093 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 SETSIPP0DME0 302 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 PTPN2P17706 415 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 CYP2F1P24903 491 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 GBP1P32455 592 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 PBX1P40424 430 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 ZNF75DP51815 510 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 ZNF132P52740 706 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 MAP3K7CLP57077 242 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 JAM2P57087 298 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 ZBED6P86452 979 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 KCNC3Q14003 757 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 PLCL1Q15111 1095 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 TCEAL1Q15170 157 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 CNGA2Q16280 664 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 ZSCAN26Q16670 478 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 TDRD12Q587J7 1177 aaKnown RBP6.48□□□□□ -1.37
SF3B1-209ENST00000479532 ATAT1Q5SQI0 421 aa6.48□□□□□ -1.37
SF3B1-209ENST00000479532 CYP4A22Q5TCH4 519 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms