RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 DYRK4Q9NR20 520 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ATXN10Q9UBB4 475 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 LZTS1Q9Y250 596 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 PTCH2Q9Y6C5 1203 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 E5RI56 91 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 LTFP02788 710 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 CTNNB1P35222 781 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 APLP1P51693 650 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 CLCNKBP51801 687 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 OGDHQ02218 1023 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 BTKQ06187 659 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 SFSWAPQ12872 951 aaKnown RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 GRB14Q14449 540 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 HABP4Q5JVS0 413 aaKnown RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF697Q5TEC3 545 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 TMCO4Q5TGY1 634 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 DPY19L2P1Q6NXN4 242 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 NT5DC4Q86YG4 428 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 CYP4X1Q8N118 509 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ATP6V0D2Q8N8Y2 350 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 TFB1MQ8WVM0 346 aaKnown RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF669Q96BR6 464 aaPredicted RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 RMDN2Q96LZ7 410 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 NR1H4Q96RI1 486 aaPredicted RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.673e-9■■■■■ 34.7
TOP3B-210ENST00000444502 H0YGN5 161 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ZSCAN9O15535 394 aaPredicted RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 SNX3O60493 162 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 HSPA4LO95757 839 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 F9P00740 461 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 S100BP04271 92 aaPredicted RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 BGNP21810 368 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 CDKN2BP42772 138 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF143P52747 638 aaPredicted RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ALDH18A1P54886 795 aaKnown RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 CRADDP78560 199 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 UBAP2Q5T6F2 1119 aaKnown RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 HERPUD2Q9BSE4 406 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 VANGL2Q9ULK5 521 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 DRG1Q9Y295 367 aaKnown RBP10.86□□□□□ -0.67
TOP3B-210ENST00000444502 NFS1Q9Y697 457 aa10.86□□□□□ -0.67
TOP3B-210ENST00000444502 USP12O75317 370 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ENTPD5O75356 428 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ENO1P06733 434 aaKnown RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 SELPP16109 830 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 SYN1P17600 705 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ITIH4Q14624 930 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 RCN1Q15293 331 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CHI3L2Q15782 390 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ANKRD22Q5VYY1 191 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 NLRP9Q7RTR0 991 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 XYLT1Q86Y38 959 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 RBM12BQ8IXT5 1001 aaKnown RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 R3HDMLQ9H3Y0 253 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 VPS28Q9UK41 221 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ZWINTO95229 277 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 NPR3P17342 541 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 PTDSS1P48651 473 aaKnown RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 TUSC3Q13454 348 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 KRT33BQ14525 404 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CYP1B1Q16678 543 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF792Q3KQV3 632 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 C9orf57Q5W0N0 161 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 SLC24A5Q71RS6 500 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 BLOC1S5Q8TDH9 187 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CKAP2Q8WWK9 683 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 TRIB2Q92519 343 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 TLCD1Q96CP7 247 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 FZD8Q9H461 694 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 HEY2Q9UBP5 337 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 SLC24A2Q9UI40 661 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 SF3B1O75533 1304 aaKnown RBP eCLIP10.85□□□□□ -0.673e-6■■■■■ 54.8
TOP3B-210ENST00000444502 CILPO75339 1184 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 GMNNO75496 209 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CCR1P32246 355 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CASP2P42575 452 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CSE1LP55060 971 aaKnown RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 LACTB2Q53H82 288 aaPredicted RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 GDF6Q6KF10 455 aaPredicted RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF296Q8WUU4 475 aaPredicted RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 SPOCK2Q92563 424 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CD101Q93033 1021 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 MYLPFQ96A32 169 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 FAM161BQ96MY7 647 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 RNF157Q96PX1 679 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 TRIM56Q9BRZ2 755 aaKnown RBP10.85□□□□□ -0.67
TOP3B-210ENST00000444502 SYT11Q9BT88 431 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 MAGEB5Q9BZ81 275 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF180Q9UJW8 692 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 NR2E3Q9Y5X4 410 aa10.85□□□□□ -0.67
TOP3B-210ENST00000444502 CFLARO15519 480 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ASMTLO95671 621 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 RPL17P18621 184 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 GDF10P55107 478 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 POU5F1Q01860 360 aaKnown RBP10.84□□□□□ -0.67
TOP3B-210ENST00000444502 DUSP4Q13115 394 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ARHGAP15Q53QZ3 475 aa10.84□□□□□ -0.67
TOP3B-210ENST00000444502 ZNF618Q5T7W0 954 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms