RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NME7Q9Y5B8 376 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 INSL5Q9Y5Q6 135 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 CLUHO75153 1309 aa5.2□□□□□ -1.58
VPS41-205ENST00000414632 MTMR11A4FU01 709 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 OR6C75A6NL08 312 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 LOC730098B7Z3J9 87 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CETN3O15182 167 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 NPHS1O60500 1241 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 OAZ2O95190 189 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 HLA-DRAP01903 254 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 C4BPAP04003 597 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 EPB41P11171 864 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 MYL4P12829 197 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 KRT13P13646 458 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 ATF2P15336 505 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CEBPBP17676 345 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 ENDOUP21128 410 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 CCNE1P24864 410 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 LMO2P25791 158 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 PSMC2P35998 433 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 PNPLA4P41247 253 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 PIK3CAP42336 1068 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 GPR15P49685 360 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 VAMP7P51809 220 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CDH8P55286 799 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 SESN3P58005 492 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 RPL11P62913 178 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 TNNC1P63316 161 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 POU5F1Q01860 360 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 PPP3CAQ08209 521 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 TWF1Q12792 350 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 KLF1Q13351 362 aaPredicted RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 STIM1Q13586 685 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 MLC1Q15049 377 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 SLC5A9Q2M3M2 681 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 SOWAHAQ2M3V2 549 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 ZNF699Q32M78 642 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 WDR72Q3MJ13 1102 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CCDC40Q4G0X9 1142 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 DCAF17Q5H9S7 520 aaPredicted RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 SDHAF4Q5VUM1 108 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 BROXQ5VW32 411 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 TCERG1LQ5VWI1 586 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 RNF43Q68DV7 783 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 NXNQ6DKJ4 435 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CENPPQ6IPU0 288 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 SLC8B1Q6J4K2 584 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 THAP5Q7Z6K1 395 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 ALYREFQ86V81 257 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 CREG2Q8IUH2 290 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CREBRFQ8IUR6 639 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 GPR65Q8IYL9 337 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 THEM5Q8N1Q8 247 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 LRRC52Q8N7C0 313 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 TDRD5Q8NAT2 981 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 TMEM52Q8NDY8 209 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CMASQ8NFW8 434 aaPredicted RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 SPATA20Q8TB22 786 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 ITFG1Q8TB96 612 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 HDAC7Q8WUI4 952 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 KBTBD7Q8WVZ9 684 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 RSAD2Q8WXG1 361 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 TCEAL4Q96EI5 215 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 NECTIN4Q96NY8 510 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 GBP4Q96PP9 640 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 SEPT5Q99719 369 aaPredicted RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 SDCBP2Q9H190 292 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 NUP62CLQ9H1M0 184 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 DPEP3Q9H4B8 488 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 CLSTN2Q9H4D0 955 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 LUC7LQ9NQ29 371 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 ZDHHC7Q9NXF8 308 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 DNMT3BQ9UBC3 853 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 HMGXB4Q9UGU5 601 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 AFF4Q9UHB7 1163 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 DPP7Q9UHL4 492 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 GTF3C4Q9UKN8 822 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 DSEQ9UL01 958 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 LUC7L2Q9Y383 392 aaKnown RBP5.19□□□□□ -1.58
VPS41-205ENST00000414632 NR2E1Q9Y466 385 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 YIPF1Q9Y548 306 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 KMT2EQ8IZD2 1858 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 MIA3Q5JRA6 1907 aa5.19□□□□□ -1.58
VPS41-205ENST00000414632 TMEM82A0PJX8 343 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 ARHGEF37A1IGU5 675 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 MYBPHLA2RUH7 354 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 GOLGA6CA6NDK9 693 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 GOLGA6BA6NDN3 693 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 PSMA7O14818 248 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 RFPL1O75677 317 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 KRT37O76014 449 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 SNUPNO95149 360 aaKnown RBP5.18□□□□□ -1.58
VPS41-205ENST00000414632 MT-CO1P00395 513 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 HNRNPA1P09651 372 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS41-205ENST00000414632 GOLGA6DP0CG33 693 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 ATF6P18850 670 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 KRT15P19012 456 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 CD58P19256 250 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 CYP2F1P24903 491 aa5.18□□□□□ -1.58
VPS41-205ENST00000414632 RPL13P26373 211 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms