RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ZC3H12AQ5D1E8 599 aaKnown RBP14.01□□□□□ -0.17
VCP-201ENST00000358901 FAM183BPQ6ZVS7 135 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 B4GALNT2Q8NHY0 566 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 RMND5BQ96G75 393 aaPredicted RBP14.01□□□□□ -0.17
VCP-201ENST00000358901 CDT1Q9H211 546 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 PRDM12Q9H4Q4 367 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 MID1IP1Q9NPA3 183 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 RGS18Q9NS28 235 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 HES2Q9Y543 173 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 FOXO6A8MYZ6 492 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 CBX4O00257 560 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 SNUPNO95149 360 aaKnown RBP14.01□□□□□ -0.17
VCP-201ENST00000358901 TNFAIP8O95379 198 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 TRUB2O95900 331 aaKnown RBP14.01□□□□□ -0.17
VCP-201ENST00000358901 CRABP2P29373 138 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 PLEKHA7Q6IQ23 1121 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 COPS5Q92905 334 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 NSMCE2Q96MF7 247 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 MAN1C1Q9NR34 630 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 NDUFAF1Q9Y375 327 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 PTPRAP18433 802 aa14□□□□□ -0.17
VCP-201ENST00000358901 CTXN3Q4LDR2 81 aa14□□□□□ -0.17
VCP-201ENST00000358901 ZFP1Q6P2D0 407 aa14□□□□□ -0.17
VCP-201ENST00000358901 TTC30AQ86WT1 665 aa14□□□□□ -0.17
VCP-201ENST00000358901 CERKQ8TCT0 537 aa14□□□□□ -0.17
VCP-201ENST00000358901 PRKD2Q9BZL6 878 aa14□□□□□ -0.17
VCP-201ENST00000358901 TKTL2Q9H0I9 626 aa14□□□□□ -0.17
VCP-201ENST00000358901 CDHR5Q9HBB8 845 aa14□□□□□ -0.17
VCP-201ENST00000358901 SHOX2O60902 331 aaPredicted RBP14□□□□□ -0.17
VCP-201ENST00000358901 LTFP02788 710 aa14□□□□□ -0.17
VCP-201ENST00000358901 MZF1P28698 734 aaPredicted RBP14□□□□□ -0.17
VCP-201ENST00000358901 NCKAP1LP55160 1127 aa14□□□□□ -0.17
VCP-201ENST00000358901 FKBP1AP62942 108 aaKnown RBP14□□□□□ -0.17
VCP-201ENST00000358901 NEPROQ6NW34 567 aa14□□□□□ -0.17
VCP-201ENST00000358901 MYO1HQ8N1T3 1032 aa14□□□□□ -0.17
VCP-201ENST00000358901 JOSD2Q8TAC2 188 aa14□□□□□ -0.17
VCP-201ENST00000358901 MPP4Q96JB8 637 aa14□□□□□ -0.17
VCP-201ENST00000358901 ACOX2Q99424 681 aa14□□□□□ -0.17
VCP-201ENST00000358901 MECRQ9BV79 373 aa14□□□□□ -0.17
VCP-201ENST00000358901 LRMDAQ9H2I8 198 aa14□□□□□ -0.17
VCP-201ENST00000358901 RRN3Q9NYV6 651 aa14□□□□□ -0.17
VCP-201ENST00000358901 SLC17A7Q9P2U7 560 aa14□□□□□ -0.17
VCP-201ENST00000358901 TMEM191CA6NGB0 347 aa14□□□□□ -0.17
VCP-201ENST00000358901 RAMP2O60895 175 aa14□□□□□ -0.17
VCP-201ENST00000358901 ZNF682O95780 498 aa14□□□□□ -0.17
VCP-201ENST00000358901 USP17L7P0C7H9 530 aa14□□□□□ -0.17
VCP-201ENST00000358901 DDX5P17844 614 aaKnown RBP14□□□□□ -0.17
VCP-201ENST00000358901 MMP8P22894 467 aa14□□□□□ -0.17
VCP-201ENST00000358901 SKIV2L2P42285 1042 aaKnown RBP14□□□□□ -0.17
VCP-201ENST00000358901 RPL14P50914 215 aaKnown RBP14□□□□□ -0.17
VCP-201ENST00000358901 DEFA1P59665 94 aa14□□□□□ -0.17
VCP-201ENST00000358901 DEFA3P59666 94 aa14□□□□□ -0.17
VCP-201ENST00000358901 PPIDQ08752 370 aaKnown RBP14□□□□□ -0.17
VCP-201ENST00000358901 SWT1Q5T5J6 900 aaKnown RBP14□□□□□ -0.17
VCP-201ENST00000358901 EEF1DP3Q658K8 133 aa14□□□□□ -0.17
VCP-201ENST00000358901 ANKS6Q68DC2 871 aa14□□□□□ -0.17
VCP-201ENST00000358901 TAF2Q6P1X5 1199 aa14□□□□□ -0.17
VCP-201ENST00000358901 NT5DC4Q86YG4 428 aa14□□□□□ -0.17
VCP-201ENST00000358901 C12orf56Q8IXR9 622 aa14□□□□□ -0.17
VCP-201ENST00000358901 CENPLQ8N0S6 344 aaPredicted RBP14□□□□□ -0.17
VCP-201ENST00000358901 FBXO39Q8N4B4 442 aa14□□□□□ -0.17
VCP-201ENST00000358901 WNT8BQ93098 351 aa14□□□□□ -0.17
VCP-201ENST00000358901 CERS2Q96G23 380 aa14□□□□□ -0.17
VCP-201ENST00000358901 MFSD14AQ96MC6 490 aa14□□□□□ -0.17
VCP-201ENST00000358901 TRAPPC9Q96Q05 1148 aa14□□□□□ -0.17
VCP-201ENST00000358901 SEMA6AQ9H2E6 1030 aa14□□□□□ -0.17
VCP-201ENST00000358901 ACTR8Q9H981 624 aa14□□□□□ -0.17
VCP-201ENST00000358901 POPDC2Q9HBU9 364 aa14□□□□□ -0.17
VCP-201ENST00000358901 ZFYVE28Q9HCC9 887 aa14□□□□□ -0.17
VCP-201ENST00000358901 PALMDQ9NP74 551 aa14□□□□□ -0.17
VCP-201ENST00000358901 RAD54BQ9Y620 910 aa14□□□□□ -0.17
VCP-201ENST00000358901 ADAMTS3O15072 1205 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 PEX1O43933 1283 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 PARNO95453 639 aaKnown RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 PRKAA2P54646 552 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 XRCC4Q13426 336 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 NRF1Q16656 503 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 TTC27Q6P3X3 843 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 PLEKHA8Q96JA3 519 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 EBNA1BP2Q99848 306 aaKnown RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 KCTD14Q9BQ13 255 aaPredicted RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 ATP5BP06576 529 aaKnown RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 FCGR1AP12314 374 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 NOS2P35228 1153 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 RAD23AP54725 363 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 DNAJC14Q6Y2X3 702 aaPredicted RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 SLC44A2Q8IWA5 706 aaPredicted RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 BBS2Q9BXC9 721 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 WDR41Q9HAD4 459 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 SORCS3Q9UPU3 1222 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 KCNH4Q9UQ05 1017 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 CSTF3Q12996 717 aaKnown RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 PWP1Q13610 501 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 MFSD5Q6N075 450 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 PSTKQ8IV42 348 aaKnown RBP13.99□□□□□ -0.17
VCP-201ENST00000358901 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 VAT1Q99536 393 aa13.99□□□□□ -0.17
VCP-201ENST00000358901 LGMNQ99538 433 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms