RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RAD54LQ92698 747 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 NKD1Q969G9 470 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CALML4Q96GE6 196 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 DRC1Q96MC2 740 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CYP2S1Q96SQ9 504 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CCDC94Q9BW85 323 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 EPB41L5Q9HCM4 733 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 BLOC1S4Q9NUP1 217 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PISDQ9UG56 409 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 DSEQ9UL01 958 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 GDAQ9Y2T3 454 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PCDHGB7Q9Y5F8 929 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 MYH10P35580 1976 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 LRRC72A6NJI9 287 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 KCNN4O15554 427 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PSMD10O75832 226 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ODC1P11926 461 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 UBA7P41226 1012 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 NR0B2Q15466 257 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ZNF630Q2M218 657 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 TMEM164Q5U3C3 297 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 OTUD6AQ7L8S5 288 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CDR2LQ86X02 465 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PHC2Q8IXK0 858 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 DCP1BQ8IZD4 617 aaKnown RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 IQCDQ96DY2 449 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 TIPINQ9BVW5 301 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 SPHK2Q9NRA0 654 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CNTN3Q9P232 1028 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 SALL4Q9UJQ4 1053 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 NCKAP1Q9Y2A7 1128 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 LOXL2Q9Y4K0 774 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ITIH6Q6UXX5 1313 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 EME2A4GXA9 379 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 GOLGA6L19H0YKK7 550 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ADCY5O95622 1261 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 GIMD1P0DJR0 217 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 STAT6P42226 847 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 RPIAP49247 311 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 SPAG1Q07617 926 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 FOXD4Q12950 439 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 NR6A1Q15406 480 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ECM1Q16610 540 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 SPATA1Q5VX52 437 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 UNC13DQ70J99 1090 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ERMNQ8TAM6 284 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 LRRC15Q8TF66 581 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 GLMNQ92990 594 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 TRIM9Q9C026 710 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 EHD2Q9NZN4 543 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CFAP97Q9P2B7 532 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 LRWD1Q9UFC0 647 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PCDHB5Q9Y5E4 795 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CSNK1G3Q9Y6M4 447 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ANKUB1A6NFN9 424 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 PRRT4C9JH25 899 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 TDP2O95551 362 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 RPN1P04843 607 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 CYP11A1P05108 521 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 PRR29P0C7W0 189 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 MAPTP10636 758 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 NR1D1P20393 614 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 GUCY2CP25092 1073 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 LRPAP1P30533 357 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 NOP2P46087 812 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 TERF1P54274 439 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 CDH8P55286 799 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 GSDMDP57764 484 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ZRSR1Q15695 479 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 DEFB109BQ30KR1 87 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 SLC39A12Q504Y0 691 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 LRCH2Q5VUJ6 765 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 KRT79Q5XKE5 535 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 TMEM198Q66K66 360 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 BNC2Q6ZN30 1099 aaPredicted RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 TTC16Q8NEE8 873 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 OR2T34Q8NGX1 318 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 MFRPQ9BY79 579 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 THAP9Q9H5L6 903 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 PREBQ9HCU5 417 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 LIMA1Q9UHB6 759 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 DMTF1Q9Y222 760 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 MYH11P35749 1972 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ESPNB1AK53 854 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 SCAMP1O15126 338 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 MSI1O43347 362 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ACO1P21399 889 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ENPEPQ07075 957 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ZNF177Q13360 481 aaPredicted RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 PRPF4BQ13523 1007 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 ASAP3Q8TDY4 903 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 LARP4BQ92615 738 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 CCDC47Q96A33 483 aaKnown RBP6.96□□□□□ -1.3
CSTF3-201ENST00000323959 DHX58Q96C10 678 aa6.96□□□□□ -1.3
CSTF3-201ENST00000323959 NACC1Q96RE7 527 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms