RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 ITGB2P05107 769 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 HAPLN1P10915 354 aaPredicted RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 ATF2P15336 505 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 ATP2A2P16615 1042 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 TNFRSF8P28908 595 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 ACTN2P35609 894 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 ADCY8P40145 1251 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 ALDH1A3P47895 512 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 ATP5OP48047 213 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 CARSP49589 748 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 VPS41P49754 854 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 AIF1P55008 147 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 EIF3EP60228 445 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 OTUD4Q01804 1114 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 KLF1Q13351 362 aaPredicted RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 SIX1Q15475 284 aaPredicted RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 TRIP13Q15645 432 aaPredicted RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 TRIP4Q15650 581 aaPredicted RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 TTC27Q6P3X3 843 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 EMBQ6PCB8 327 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 DARS2Q6PI48 645 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 C1orf228Q6PIY5 440 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 DDX53Q86TM3 631 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 MON1AQ86VX9 555 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 PSTKQ8IV42 348 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 TTC9BQ8N6N2 239 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 CCDC185Q8N715 623 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 CCDC89Q8N998 374 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 ZNF417Q8TAU3 575 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 CCHCR1Q8TD31 782 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 GIPC2Q8TF65 315 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 CASKIN2Q8WXE0 1202 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 VWCEQ96DN2 955 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 GDAP1L1Q96MZ0 367 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 RNF157Q96PX1 679 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 ZNF587Q96SQ5 575 aaPredicted RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 SLC9A7Q96T83 725 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 FERMT1Q9BQL6 677 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 HERPUD2Q9BSE4 406 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 NACA2Q9H009 215 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 CYP4F11Q9HBI6 524 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 GDF3Q9NR23 364 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 TLR8Q9NR97 1041 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 PIGVQ9NUD9 493 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 MTRF1LQ9UGC7 380 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 AFF4Q9UHB7 1163 aaKnown RBP10.09□□□□□ -0.79
TTC1-201ENST00000231238 SLC6A14Q9UN76 642 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 SCML2Q9UQR0 700 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 SSX2IPQ9Y2D8 614 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 SNX24Q9Y343 169 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 HEY1Q9Y5J3 304 aa10.09□□□□□ -0.79
TTC1-201ENST00000231238 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 WDR27A2RRH5 827 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 C3orf70A6NLC5 250 aaPredicted RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 APOC4-APOC2K7ER74 178 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 EEF2KO00418 725 aaKnown RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 APOC2P02655 101 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 TGM2P21980 687 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 VCPP55072 806 aaKnown RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 PITX1P78337 314 aaPredicted RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 DSG1Q02413 1049 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 CA9Q16790 459 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 ANKRD20A8PQ5CZ79 823 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 TPGS2Q68CL5 300 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 SLC8B1Q6J4K2 584 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 PDZD4Q76G19 769 aaPredicted RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 TMC7Q7Z402 723 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 TAC4Q86UU9 113 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 DDX42Q86XP3 938 aaKnown RBP eCLIP10.08□□□□□ -0.8
TTC1-201ENST00000231238 STKLD1Q8NE28 680 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 ACTL9Q8TC94 416 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 DQX1Q8TE96 717 aaKnown RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.08□□□□□ -0.8
TTC1-201ENST00000231238 SPATA17Q96L03 361 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 ZNF512Q96ME7 567 aaPredicted RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 SERPINB11Q96P15 392 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 RUFY1Q96T51 708 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 RAD9AQ99638 391 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 C11orf84Q9BUA3 381 aaPredicted RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.08□□□□□ -0.8
TTC1-201ENST00000231238 OLA1Q9NTK5 396 aaKnown RBP10.08□□□□□ -0.8
TTC1-201ENST00000231238 TMEM51Q9NW97 253 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 GMIPQ9P107 970 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 SLC12A6Q9UHW9 1150 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 DNPEPQ9ULA0 475 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 FZD10Q9ULW2 581 aa10.08□□□□□ -0.8
TTC1-201ENST00000231238 SLC38A8A6NNN8 435 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 NDC80O14777 642 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 ATP8B1O43520 1251 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 TBC1D4O60343 1298 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 FGF18O76093 207 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 ENDOD1O94919 500 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 CSPG5O95196 566 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 KRT14P02533 472 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 APOEP02649 317 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 L1CAMP32004 1257 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 CCR1P32246 355 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 CTNNB1P35222 781 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 ADRA1BP35368 520 aa10.07□□□□□ -0.8
TTC1-201ENST00000231238 PLTPP55058 493 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms