RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Pdk1Q8BFP9 434 aaKnown RBP16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Znf76Q8BMU0 568 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Abi1Q8CBW3 481 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Tada2aQ8CHV6 443 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 NcaldQ91X97 193 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 GhdcQ99J23 532 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Spata9Q9D9R3 252 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Gm29133A0A1B0GT72 266 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 5830411N06RikB3F5L4 1112 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 BC049352E9Q2Z6 85 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 C6E9Q6D8 931 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 VdrP48281 422 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 RnaselQ05921 735 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 McuQ3UMR5 350 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Slc9b2Q5BKR2 547 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Olfr867Q7TRF3 331 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 NaprtQ8CC86 538 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rxfp2Q91ZZ5 737 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Q922M7 232 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Polr3hQ9D2C6 204 aaKnown RBP16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Fam122aQ9DB52 284 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Dusp6Q9DBB1 381 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Net1Q9Z206 595 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Plin4O88492 1403 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 MycP01108 439 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Icam1P13597 537 aaKnown RBP16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Pyroxd1Q3TMV7 498 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Dclre1bQ8C7W7 541 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Zfp62Q8C827 914 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Calcoco1Q8CGU1 691 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Fcho1Q8K285 873 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 GabrqQ9JLF1 638 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Gm43951A0A0N4SUT6 962 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Pcsk6F6XJP7 959 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Gm11236J3QMS7 360 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Atp2a2O55143 1044 aaKnown RBP16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Snx3O70492 162 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 GckP52792 465 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cldn11Q60771 207 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cntn2Q61330 1040 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Msi1Q61474 362 aaKnown RBP16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Thnsl1Q8BH55 747 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Prr33Q8C494 260 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Pde10aQ8CA95 790 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Hmgcll1Q8JZS7 343 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Vps37bQ8R0J7 285 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Mrps17Q9CQE3 120 aaKnown RBP16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Arl2Q9D0J4 184 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Mkrn2Q9ERV1 416 aaKnown RBP16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Mpp5Q9JLB2 675 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Alpk2Q91ZB0 2144 aa16.31■□□□□ 0.2
Trim39-203ENSMUST00000113706 Supt3B0QZW4 406 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Grip2G3XA20 1042 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Srpk1O70551 648 aaKnown RBP16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rcn1Q05186 325 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 March5Q3KNM2 278 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ccdc110Q3V125 848 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Prkaa1Q5EG47 559 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Arhgef18Q6P9R4 1021 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Olfr412Q7TRW7 312 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Phf24Q80TL4 400 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Spdye4bQ8CDE8 236 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 B3galt6Q91Z92 325 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Gps1Q99LD4 471 aaKnown RBP16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Gemin2Q9CQQ4 269 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rin2Q9D684 903 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Sgf29Q9DA08 293 aaKnown RBP16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rsc1a1Q9ER99 582 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 AuhQ9JLZ3 314 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Pbx3O35317 434 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Odc1P00860 461 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ptger1P35375 405 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Psen1P49769 467 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Myl2P51667 166 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Stambpl1Q76N33 436 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Pcsk9Q80W65 694 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Heatr3Q8BQM4 679 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Lrrc19Q8BZT5 364 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Sytl2Q99N50 950 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Terb2Q9D494 218 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Plxna3P70208 1872 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ighv11-2A0A075B5R8 117 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Gm29554A0A087WNW4 188 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Tnfrsf14A0A1W2P7D5 276 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Spata31E9QAF0 1014 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 E2f6O54917 272 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Lag3Q61790 521 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Tpp2Q64514 1262 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Dnajb13Q80Y75 316 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Znf473Q8BI67 892 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cnksr3Q8BMA3 555 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 GancQ8BVW0 898 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Smyd2Q8R5A0 433 aa16.3■□□□□ 0.2
Trim39-203ENSMUST00000113706 Igkv5-43A0A0B4J1J2 115 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Olfr271-ps1A0A1L1SQH2 283 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Slc6a13P31649 602 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Acot8P58137 320 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Gpd1lQ3ULJ0 351 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Serpinb6Q60854 378 aa16.29■□□□□ 0.2
Trim39-203ENSMUST00000113706 Znf821Q6PD05 413 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms