RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Gm17175E9Q528 179 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Rb1P13405 921 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Lmnb1P14733 588 aaKnown RBP9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Ppp3caP63328 521 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Adam6bQ6IMH7 756 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Rasal3Q8C2K5 1041 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tmc7Q8C428 726 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Sox30Q8CGW4 782 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Trpv3Q8K424 791 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Slc30a5Q8R4H9 761 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Caskin2Q8VHK1 1201 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Kdelr1Q99JH8 212 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Bco2Q99NF1 532 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Vmn2r4K7N784 913 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Il1aP01582 270 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 JchainP01592 159 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Atp5bP56480 529 aaKnown RBP9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Bace1P56818 501 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Grin2cQ01098 1239 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Nat9Q3UG98 241 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Thop1Q8C1A5 687 aaKnown RBP9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Coq6Q8R1S0 476 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tmprss4Q8VCA5 435 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Plbd1Q8VCI0 550 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Asb11Q9CQ31 323 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Kif12Q9D2Z8 642 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Prl2c5Q9JLV9 222 aa9.56□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 A0A1Y7VIU7 259 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Cdk7Q03147 346 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Nt5dc3Q3UHB1 546 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Pcnx4Q3UVY5 1174 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 LbpQ61805 481 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Cdc14aQ6GQT0 603 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Aldh3b1Q80VQ0 468 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 SncaipQ99ME3 962 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 GarsQ9CZD3 729 aaKnown RBP9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tmem115Q9WUH1 350 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tnk2O54967 1055 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 AvilO88398 819 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Mcpt4P21812 246 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Plekhf1Q3TB82 279 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Klhl17Q6TDP3 640 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tas2r125Q7M710 311 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Ubash3bQ8BGG7 638 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Btnl9Q8BJE2 536 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Prkaa2Q8BRK8 552 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Lca5lQ8C0X0 741 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Scara3Q8C850 606 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Lars2Q8VDC0 902 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Akr1c21Q91WR5 323 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Q922M7 232 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Dctn2Q99KJ8 402 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Gsdmdc1Q9D8T2 487 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Cldn3Q9Z0G9 219 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Smok3cA0A087WSF2 504 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Ttc7bE9Q6P5 843 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 H2-AaP01910 256 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Lrpap1P55302 360 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Serpina3mQ03734 418 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Ubtfl1Q3USZ2 394 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Cyp2c66Q5GLZ0 490 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Podnl1Q6P3Y9 559 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Mis18bp1Q80WQ8 998 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Znf451Q8C0P7 1056 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 TbccQ8VCN9 341 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Pcdhb21Q91V48 774 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Snapc2Q91XA5 359 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tsc22d3Q9Z2S7 137 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Rad21l1A2AU37 552 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Gm5160F8VPN3 147 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Vmn2r38G3UYA8 861 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Vmn2r33K7N705 861 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Vmn2r44L7N2E1 861 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Mboat4P0C7A3 435 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Bmp2P21274 394 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Hoxd10P28359 340 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 3830417A13RikQ8BQJ2 303 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tyw3Q8BSA9 257 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Rassf3Q99P51 232 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Khdc3Q9CWU5 440 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 AprtP08030 180 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Sel1l2Q3V172 688 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Soat1Q61263 540 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Usp6nlQ80XC3 819 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Epb41l5Q8BGS1 731 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Gabra5Q8BHJ7 463 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Ttc23Q8CHY7 488 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Uxs1Q91XL3 420 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 PdgfdQ925I7 370 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Ndufa5Q9CPP6 116 aa9.55□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Ttc23lA6H6E9 458 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Pold2O35654 469 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 InaP46660 501 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Wee2Q66JT0 555 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Scube3Q66PY1 993 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Tcaf3Q6QR59 914 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 SyncripQ7TMK9 623 aaKnown RBP9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Rfx4Q7TNK1 735 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 Gpr139Q80UC8 345 aa9.54□□□□□ -0.88
Prpf40a-201ENSMUST00000076313 GskipQ8BGR8 139 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms