RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 LGMNQ99538 433 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 RSPH9Q9H1X1 276 aaPredicted RBP17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 ZSCAN16Q9H4T2 348 aaPredicted RBP17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 DMAC2Q9NW81 257 aa17.93■□□□□ 0.46
CSNK1E-215ENST00000612795 CFAP46Q8IYW2 2715 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 MAST4O15021 2626 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 ERVH48-1M5A8F1 160 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 POLR2DO15514 142 aaKnown RBP17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 PPP6R2O75170 966 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 NR3C1P04150 777 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 GLDCP23378 1020 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 AFMP43652 599 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 TKTL1P51854 596 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 GALCP54803 685 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 ST8SIA6P61647 398 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 CUL4AQ13619 759 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 CUL4BQ13620 913 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 SHBQ15464 509 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 SLC45A4Q5BKX6 768 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 SPACA3Q8IXA5 215 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 ZC3H3Q8IXZ2 948 aaKnown RBP17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 RNF139Q8WU17 664 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 OMDQ99983 421 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 MTG2Q9H4K7 406 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 APOBEC3GQ9HC16 384 aaKnown RBP17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 SERGEFQ9UGK8 458 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 CLCA2Q9UQC9 943 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 FRMD4BQ9Y2L6 1034 aa17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 HBS1LQ9Y450 684 aaKnown RBP17.92■□□□□ 0.46
CSNK1E-215ENST00000612795 A0A1W2PP55 124 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 MID1O15344 667 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 CUTAO60888 179 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 RNASEH2AO75792 299 aaKnown RBP17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 ZBED1O96006 694 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 ILKQ13418 452 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 CST6Q15828 149 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 TBC1D25Q3MII6 688 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 ADGRF1Q5T601 910 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 KIAA0907Q7Z7F0 614 aaPredicted RBP17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 OXR1Q8N573 874 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 OR2T34Q8NGX1 318 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 TSC1Q92574 1164 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 ULBP1Q9BZM6 244 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 MMRN2Q9H8L6 949 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 EBF2Q9HAK2 575 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
CSNK1E-215ENST00000612795 SIN3BO75182 1162 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 LATS1O95835 1130 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 SLFN14P0C7P3 912 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 CD70P32970 193 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 SGSHP51688 502 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 VAMP7P51809 220 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 RAB41Q5JT25 222 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 ERICH6BQ5W0A0 696 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 ERICH1Q86X53 443 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 DHX40Q8IX18 779 aaKnown RBP17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 ZNF557Q8N988 423 aaPredicted RBP17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 WFDC5Q8TCV5 224 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 TAS1R2Q8TE23 839 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 SERAC1Q96JX3 654 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 UBXN6Q9BZV1 441 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 EXOC1Q9NV70 894 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 SFMBT1Q9UHJ3 866 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 STOML2Q9UJZ1 356 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 FZD4Q9ULV1 537 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 DOCK9Q9BZ29 2069 aa17.9■□□□□ 0.46
CSNK1E-215ENST00000612795 TDRD6O60522 2096 aaKnown RBP17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 A0A1W2PR77 199 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 TBL1XO60907 577 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 TRIM49P0CI25 452 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 TRIM49CP0CI26 452 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 CKMT2P17540 419 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 GCLMP48507 274 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 KCNH2Q12809 1159 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 BNIP3Q12983 259 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 C1orf220Q5T0J3 134 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 BROXQ5VW32 411 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 PCSK4Q6UW60 755 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 MMAAQ8IVH4 418 aaKnown RBP17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 MFN1Q8IWA4 741 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 KIAA0895Q8NCT3 520 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 ZNF248Q8NDW4 579 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 TMEM174Q8WUU8 243 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 NDRG1Q92597 394 aaKnown RBP17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 EDEM1Q92611 657 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 NAF1Q96HR8 494 aaKnown RBP17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 NEUROG2Q9H2A3 272 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 LRRC4Q9HBW1 653 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 MYO18BQ8IUG5 2567 aa17.89■□□□□ 0.45
CSNK1E-215ENST00000612795 TLR4O00206 839 aa17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 PDXKO00764 312 aa17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 MSI1O43347 362 aaKnown RBP17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 PSMD8P48556 350 aa17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 CCR5P51681 352 aa17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 PCBP4P57723 403 aaKnown RBP17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 TMPRSS3P57727 454 aa17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 NXPH1P58417 271 aa17.88■□□□□ 0.45
CSNK1E-215ENST00000612795 INSM1Q01101 510 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms