RNA–Protein interactions for RNA: ENST00000585089.5

IFT20-214, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-214ENST00000585089 MFSD2AQ8NA29 543 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 VRTNQ9H8Y1 702 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 PNPLA8Q9NP80 782 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 SERGEFQ9UGK8 458 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 SEPT3Q9UH03 358 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 FZD4Q9ULV1 537 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 MYO9AB2RTY4 2548 aa15.3■□□□□ 0.04
IFT20-214ENST00000585089 TDRD6O60522 2096 aaKnown RBP15.29■□□□□ 0.04
IFT20-214ENST00000585089 H3BQV1 296 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 AFPP02771 609 aaKnown RBP15.29■□□□□ 0.04
IFT20-214ENST00000585089 PABPC1P11940 636 aaKnown RBP15.29■□□□□ 0.04
IFT20-214ENST00000585089 P4HA1P13674 534 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 ST8SIA6P61647 398 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 CYP24A1Q07973 514 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 BIRC3Q13489 604 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 NAPEPLDQ6IQ20 393 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 IGF2-ASQ6U949 168 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 RSRC2Q7L4I2 434 aaKnown RBP15.29■□□□□ 0.04
IFT20-214ENST00000585089 CCDC186Q7Z3E2 898 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 SPATS2Q86XZ4 545 aaKnown RBP15.29■□□□□ 0.04
IFT20-214ENST00000585089 FAM217AQ8IXS0 508 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.29■□□□□ 0.04
IFT20-214ENST00000585089 ZNF516Q92618 1163 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 EPSTI1Q96J88 318 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 ARHGAP9Q9BRR9 750 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 ABCG4Q9H172 646 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 SDCBP2Q9H190 292 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 MTG2Q9H4K7 406 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 MARCH2Q9P0N8 246 aa15.29■□□□□ 0.04
IFT20-214ENST00000585089 FLNCQ14315 2725 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 SLC12A8A0AV02 714 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 FRMD3A2A2Y4 597 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 MID1O15344 667 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 KIF11P52732 1056 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 NDST1P52848 882 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 ZNF445P59923 1031 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 NFKB2Q00653 900 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 OVGP1Q12889 678 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 CST6Q15828 149 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 ZSCAN23Q3MJ62 389 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 C3orf38Q5JPI3 329 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 SND1Q7KZF4 910 aaKnown RBP eCLIP15.28■□□□□ 0.04
IFT20-214ENST00000585089 TMC6Q7Z403 805 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 IQCHQ86VS3 1027 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 UNC93AQ86WB7 457 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 CCDC65Q8IXS2 484 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 C12orf29Q8N999 325 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 OR4C6Q8NH72 309 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 PLD4Q96BZ4 506 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 TMA16Q96EY4 203 aaKnown RBP15.28■□□□□ 0.04
IFT20-214ENST00000585089 STARD5Q9NSY2 213 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 EVA1BQ9NVM1 165 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 SATB2Q9UPW6 733 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 SPTAN1Q13813 2472 aaKnown RBP15.28■□□□□ 0.04
IFT20-214ENST00000585089 COL12A1Q99715 3063 aa15.28■□□□□ 0.04
IFT20-214ENST00000585089 A0A1B0GVM2 712 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 SUV39H1O43463 412 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 STX6O43752 255 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 SIN3BO75182 1162 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 SLC8A1P32418 973 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 CYP2J2P51589 502 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 UBAP2LQ14157 1087 aaKnown RBP15.27■□□□□ 0.04
IFT20-214ENST00000585089 ARL13BQ3SXY8 428 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 KIAA0907Q7Z7F0 614 aaPredicted RBP15.27■□□□□ 0.04
IFT20-214ENST00000585089 PRPF39Q86UA1 669 aaKnown RBP15.27■□□□□ 0.04
IFT20-214ENST00000585089 MMAAQ8IVH4 418 aaKnown RBP15.27■□□□□ 0.04
IFT20-214ENST00000585089 ARHGAP18Q8N392 663 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 XXYLT1Q8NBI6 393 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 OR14C36Q8NHC7 312 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 HPS3Q969F9 1004 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 SLC46A1Q96NT5 459 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 OSBPL2Q9H1P3 480 aa15.27■□□□□ 0.04
IFT20-214ENST00000585089 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.04
IFT20-214ENST00000585089 LRRK2Q5S007 2527 aa15.27■□□□□ 0.03
IFT20-214ENST00000585089 TLN1Q9Y490 2541 aaKnown RBP15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3KA0A087X1G2 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3FA6NER0 549 aaPredicted RBP15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 KIF20AO95235 890 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 GP1BAP07359 652 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 SFTPCP11686 197 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 CKMT1AP12532 417 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 MYF5P13349 255 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 GOT1P17174 413 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 NUDT1P36639 197 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 TXLNAP40222 546 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 HARS2P49590 506 aaKnown RBP15.26■□□□□ 0.03
IFT20-214ENST00000585089 DUSP3P51452 185 aaPredicted RBP15.26■□□□□ 0.03
IFT20-214ENST00000585089 SKOR1P84550 965 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 EHHADHQ08426 723 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 HNRNPA1L2Q32P51 320 aaKnown RBP15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3GQ6DHY5 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
IFT20-214ENST00000585089 ZC3H3Q8IXZ2 948 aaKnown RBP15.26■□□□□ 0.03
IFT20-214ENST00000585089 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms