RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CYP46A1Q9Y6A2 500 aa7.3□□□□□ -1.24
ATXN3-236ENST00000556220 HELZP42694 1942 aaKnown RBP7.3□□□□□ -1.24
ATXN3-236ENST00000556220 PLXND1Q9Y4D7 1925 aa7.3□□□□□ -1.24
ATXN3-236ENST00000556220 DOPEY2Q9Y3R5 2298 aa7.3□□□□□ -1.24
ATXN3-236ENST00000556220 A0A0B4J269 797 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 A0A1B0GVT2 93 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 E9PMD0 336 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 SCAMP3O14828 347 aaKnown RBP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 TRIM24O15164 1050 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 TMPRSS2O15393 492 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 HOXC11O43248 304 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 CDC45O75419 566 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 OLFM2O95897 454 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 NTRK1P04629 796 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 OR52Z1P0C646 297 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 CDK4P11802 303 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 C6P13671 934 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 FDPSP14324 419 aaKnown RBP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 JUNBP17275 347 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 GUCY2CP25092 1073 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 HNF1BP35680 557 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 IL12RB1P42701 662 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 PPP3CCP48454 512 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 CSRP3P50461 194 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 SF3A1Q15459 793 aaKnown RBP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 ZNF174Q15697 407 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 KIF19Q2TAC6 998 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 DCAF12L1Q5VU92 463 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 BTBD8Q5XKL5 378 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 EGFLAMQ63HQ2 1017 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 KIAA1324Q6UXG2 1013 aaKnown RBP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 FMNL3Q8IVF7 1028 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 SCN4BQ8IWT1 228 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 CHPFQ8IZ52 775 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 PDCL2Q8N4E4 241 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 TERB1Q8NA31 727 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 KCNN1Q92952 543 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 OTUB2Q96DC9 234 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 ERLEC1Q96DZ1 483 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 BICD1Q96G01 975 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 TMEM176AQ96HP8 235 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 FUBP3Q96I24 572 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 SPATA17Q96L03 361 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 CEP295NLQ96MC4 621 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 GPR174Q9BXC1 333 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 RBCK1Q9BYM8 510 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 SLC6A17Q9H1V8 727 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 ASB7Q9H672 318 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 ITM2CQ9NQX7 267 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 KRT82Q9NSB4 513 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 SMPD4Q9NXE4 827 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 DDX43Q9NXZ2 648 aaKnown RBP7.29□□□□□ -1.24
ATXN3-236ENST00000556220 DPP3Q9NY33 737 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 CRIM1Q9NZV1 1036 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 GMIPQ9P107 970 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 LRWD1Q9UFC0 647 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 C2CD2Q9Y426 696 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 PCDHB6Q9Y5E3 794 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 MYOFQ9NZM1 2061 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 TEX15Q9BXT5 2789 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 KIAA1549LQ6ZVL6 1849 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 DENND4CQ5VZ89 1909 aa7.29□□□□□ -1.24
ATXN3-236ENST00000556220 CREBBPQ92793 2442 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 E2F8A0AVK6 867 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 H0YCG3 227 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 GFRA2O00451 464 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 SLC28A2O43868 658 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 PCDHGA12O60330 932 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 PFKFB2O60825 505 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 OAS1P00973 400 aaKnown RBP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 PIGRP01833 764 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 C1SP09871 688 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 ACAT1P24752 427 aaKnown RBP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 OXTRP30559 389 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 MAGEA11P43364 429 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 CSNK1EP49674 416 aaKnown RBP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 LIG4P49917 911 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 MYL7Q01449 175 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 ID3Q02535 119 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 CCDC173Q0VFZ6 552 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 TARDBPQ13148 414 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 ORC2Q13416 577 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 SV2CQ496J9 727 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 FAM171BQ6P995 826 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 VSTM1Q6UX27 236 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 DENND5BQ6ZUT9 1274 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 SPATA2LQ8IUW3 424 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 MSTO1Q9BUK6 570 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 TM6SF1Q9BZW5 370 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 PDRG1Q9NUG6 133 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 USP36Q9P275 1121 aaKnown RBP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 EIF2B4Q9UI10 523 aaKnown RBP7.28□□□□□ -1.24
ATXN3-236ENST00000556220 L1RE1Q9UN81 338 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 SLC5A6Q9Y289 635 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 RAD54BQ9Y620 910 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 SCN1AP35498 2009 aa7.28□□□□□ -1.24
ATXN3-236ENST00000556220 MYO9AB2RTY4 2548 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms