RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 AMFRQ9UKV5 643 aa3.75□□□□□ -1.81
SNHG1-202ENST00000535689 DRG1Q9Y295 367 aaKnown RBP3.75□□□□□ -1.81
SNHG1-202ENST00000535689 PCDHGB2Q9Y5G2 931 aa3.75□□□□□ -1.81
SNHG1-202ENST00000535689 NCAPD2Q15021 1401 aa3.75□□□□□ -1.81
SNHG1-202ENST00000535689 ZNF541Q9H0D2 1346 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 FAM234BA2RU67 622 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 OR2W5A6NFC9 320 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 hCG_1984214I3L0E3 225 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SYT5O00445 386 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 PPM1DO15297 605 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 PPIP5K2O43314 1243 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 RAMP2O60895 175 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 BBOX1O75936 387 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 LARGE1O95461 756 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 NTSR2O95665 410 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 CHRM2P08172 466 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SLC3A2P08195 630 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 TACR2P21452 398 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 RPS12P25398 132 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 INHBCP55103 352 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 EIF4A1P60842 406 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 TXNL4AP83876 142 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 MC2RQ01718 297 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 RAPGEF1Q13905 1077 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 PRKG1Q13976 671 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 EIF4A2Q14240 407 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SPARCL1Q14515 664 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 DHX8Q14562 1220 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 LTBP1Q14766 1721 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 TBRG1Q3YBR2 411 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 GLE1Q53GS7 698 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 TREML2Q5T2D2 321 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 MANEALQ5VSG8 457 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 RRAGBQ5VZM2 374 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 LAIR1Q6GTX8 287 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 CEP85Q6P2H3 762 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 CRTC1Q6UUV9 634 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SLC29A4Q7RTT9 530 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 PPP1R42Q7Z4L9 355 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SPRED1Q7Z699 444 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 MRGPRGQ86SM5 289 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 CAND1Q86VP6 1230 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 ZNF280BQ86YH2 543 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 ANKRD18AQ8IVF6 992 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SFTPA1Q8IWL2 248 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 CCDC28AQ8IWP9 274 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 ANKRD42Q8N9B4 389 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 MYCBPAPQ8TBZ2 947 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 LINC00476Q8WZB0 136 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 RUBCNQ92622 972 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 GLG1Q92896 1179 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SDCCAG3Q96C92 435 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SLC39A13Q96H72 371 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 ERO1AQ96HE7 468 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 LRIG1Q96JA1 1093 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 FAR2Q96K12 515 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 FYTTD1Q96QD9 318 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 CRAMP1Q96RY5 1269 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 RMDN3Q96TC7 470 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 C17orf80Q9BSJ5 609 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 TTPALQ9BTX7 342 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 CRB3Q9BUF7 120 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 HTATIP2Q9BUP3 242 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 DUSP26Q9BV47 211 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 ZNF747Q9BV97 191 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 TEX101Q9BY14 249 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 GLIS2Q9BZE0 524 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SAYSD1Q9NPB0 183 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 MGAT4CQ9UBM8 478 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 POLKQ9UBT6 870 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 SSX2IPQ9Y2D8 614 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 ZBTB1Q9Y2K1 713 aa3.74□□□□□ -1.81
SNHG1-202ENST00000535689 MRPS17Q9Y2R5 130 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 RBBP6Q7Z6E9 1792 aaKnown RBP3.74□□□□□ -1.81
SNHG1-202ENST00000535689 KIF7Q2M1P5 1343 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 TJP1Q07157 1748 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 PNMA6EA0A0J9YXQ4 647 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 NPIPB8E9PQR5 432 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 UBE2Q2LH0YL09 131 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CES2O00748 559 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 RNMTO43148 476 aaKnown RBP3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ITGA5P08648 1049 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ELFN1P0C7U0 828 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 NR2F6P10588 404 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CREB1P16220 341 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 NPPBP16860 134 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 MATN1P21941 496 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 NR4A1P22736 598 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ADRA1DP25100 572 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 GABRB3P28472 473 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 GKP32189 559 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CXCR5P32302 372 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CDK7P50613 346 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ITGA8P53708 1063 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 CXCL9Q07325 125 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 BIRC3Q13489 604 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 BOP1Q14137 746 aaKnown RBP3.73□□□□□ -1.81
SNHG1-202ENST00000535689 PUM1Q14671 1186 aaKnown RBP eCLIP3.73□□□□□ -1.81
SNHG1-202ENST00000535689 PFKFB4Q16877 469 aa3.73□□□□□ -1.81
SNHG1-202ENST00000535689 ARHGAP15Q53QZ3 475 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms