RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 CLSTN3Q9BQT9 956 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 SFXN1Q9H9B4 322 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PPCSQ9HAB8 311 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 OXSMQ9NWU1 459 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 MKS1Q9NXB0 559 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CLEC1BQ9P126 229 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CD207Q9UJ71 328 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PCDHGA9Q9Y5G4 932 aaKnown RBP8.14□□□□□ -1.11
CASP4-212ENST00000533730 PCDHGA8Q9Y5G5 932 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PCDHGA7Q9Y5G6 932 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PCDHGA6Q9Y5G7 932 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PCDHGA3Q9Y5H0 932 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PCDHGA2Q9Y5H1 932 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PRR19A6NJB7 356 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 LINC01565O15544 149 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 TGM5O43548 720 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 TBC1D4O60343 1298 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 N4BP1O75113 896 aaKnown RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 TBX10O75333 385 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 LETM1O95202 739 aaPredicted RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 IL33O95760 270 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 C4BPAP04003 597 aaKnown RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 GSNP06396 782 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 CCDC192P0DO97 292 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 EPCAMP16422 314 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 RPL17P18621 184 aaKnown RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 IGFBP6P24592 240 aaPredicted RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 PCSK1P29120 753 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 ELF1P32519 619 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 OR1D2P34982 312 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 PIK3CAP42336 1068 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 LHX1P48742 406 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 TNNC1P63316 161 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 SMARCB1Q12824 385 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 SMAD4Q13485 552 aaKnown RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 TPD52L1Q16890 204 aaPredicted RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 SGSM1Q2NKQ1 1148 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 KLHL40Q2TBA0 621 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 ZNF699Q32M78 642 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 LIN9Q5TKA1 542 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 BROXQ5VW32 411 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 TCERG1LQ5VWI1 586 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 CWF19L1Q69YN2 538 aaKnown RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 KRT39Q6A163 491 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 CES5AQ6NT32 575 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 LILRA6Q6PI73 481 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 C15orf39Q6ZRI6 1047 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 CCDC149Q6ZUS6 474 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 FAM114A1Q8IWE2 563 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 CMIPQ8IY22 773 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 SMRP1Q8NCR6 262 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 CMASQ8NFW8 434 aaPredicted RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 VN1R2Q8NFZ6 395 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 ZNF461Q8TAF7 563 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 PLEKHO2Q8TD55 490 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 BORCS6Q96GS4 357 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 MSLNLQ96KJ4 702 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 ASB2Q96Q27 587 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 TMEM8AQ9HCN3 771 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 MAN1C1Q9NR34 630 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 ANO10Q9NW15 660 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 ZDHHC7Q9NXF8 308 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 FBXL5Q9UKA1 691 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 FBXW11Q9UKB1 542 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 BARX2Q9UMQ3 279 aaPredicted RBP8.13□□□□□ -1.11
CASP4-212ENST00000533730 SNX9Q9Y5X1 595 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 CDY1Q9Y6F8 540 aa8.13□□□□□ -1.11
CASP4-212ENST00000533730 TRANK1O15050 2925 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 VWA8A3KMH1 1905 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 H3BQ06 376 aaPredicted RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 TACC1O75410 805 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 HLA-DRAP01903 254 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 POU2F2P09086 479 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 HNRNPA1P09651 372 aaKnown RBP eCLIP8.12□□□□□ -1.11
CASP4-212ENST00000533730 TRIM49P0CI25 452 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 TRIM49CP0CI26 452 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 ATF2P15336 505 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 SERPINB3P29508 390 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 HOXA9P31269 272 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 MTHFRP42898 656 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 MXI1P50539 228 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 STX17P56962 302 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 SCAND1P57086 179 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 MYL6P60660 151 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 DLG4P78352 724 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 MYL7Q01449 175 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 TSPY1Q01534 308 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 ROR1Q01973 937 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 DLX2Q07687 328 aaPredicted RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 CETN1Q12798 172 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 GPR17Q13304 367 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 CDK5R2Q13319 367 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 LRRC32Q14392 662 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 STX1AQ16623 288 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 DPCR1Q3MIW9 517 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 WDR72Q3MJ13 1102 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 DCAF17Q5H9S7 520 aaPredicted RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 ZNF667Q5HYK9 610 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 C1orf220Q5T0J3 134 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms