RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 GATA6Q92908 595 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 BTBD1Q9H0C5 482 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 TMEM245Q9H330 911 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 EIF2B4Q9UI10 523 aaKnown RBP11.3□□□□□ -0.6
PVT1-208ENST00000519481 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 APOBEC2Q9Y235 224 aaKnown RBP11.3□□□□□ -0.6
PVT1-208ENST00000519481 NCKAP1Q9Y2A7 1128 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 MSRB2Q9Y3D2 182 aa11.3□□□□□ -0.6
PVT1-208ENST00000519481 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.3□□□□□ -0.6
PVT1-208ENST00000519481 IGF2RP11717 2491 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 PCDH15Q96QU1 1955 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 RNF225M0QZC1 329 aaPredicted RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 RNASEH1O60930 286 aaKnown RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 GJB3O75712 270 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 MOCS3O95396 460 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 SEMA4FO95754 770 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 IGLV3-27P01718 113 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 APOEP02649 317 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 ASLP04424 464 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 ZNF883P0CG24 379 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 AFF3P51826 1226 aaKnown RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 PAK1Q13153 545 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 NNTQ13423 1086 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 CDH18Q13634 790 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 ZNF776Q68DI1 518 aaPredicted RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 ADIPOR2Q86V24 386 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 CARNMT1Q8N4J0 409 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 CHCHD4Q8N4Q1 142 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 ZNF366Q8N895 744 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 FIBINQ8TAL6 211 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 GANCQ8TET4 914 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 SETD7Q8WTS6 366 aaKnown RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 ZCCHC14Q8WYQ9 949 aaKnown RBP11.29□□□□□ -0.6
PVT1-208ENST00000519481 KAT5Q92993 513 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 FAM81BQ96LP2 452 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 SGK2Q9HBY8 427 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 SCML1Q9UN30 329 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 TLR6Q9Y2C9 796 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
PVT1-208ENST00000519481 CKAP5Q14008 2032 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 GOLGA6L7A0A1B0GV03 622 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 PPP1R3GB7ZBB8 358 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 BIN1O00499 593 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 MOCS2O96007 188 aaPredicted RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 CD70P32970 193 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 ACSL1P33121 698 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 SGSHP51688 502 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 STX17P56962 302 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 RPS14P62263 151 aaKnown RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 FAM193AP78312 1265 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 ADAT2Q7Z6V5 191 aaKnown RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 ARHGEF19Q8IW93 802 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 TRIM59Q8IWR1 403 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 SCUBE3Q8IX30 993 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 LMO3Q8TAP4 145 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 DQX1Q8TE96 717 aaKnown RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 CLEC4CQ8WTT0 213 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 CAMK1GQ96NX5 476 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 MED15Q96RN5 788 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 SRRTQ9BXP5 876 aaKnown RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 INTS2Q9H0H0 1204 aaKnown RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 C6orf106Q9H6K1 298 aaPredicted RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 UBE2TQ9NPD8 197 aaPredicted RBP11.28□□□□□ -0.6
PVT1-208ENST00000519481 PRSS16Q9NQE7 514 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 TM7SF3Q9NS93 570 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 TJP2Q9UDY2 1190 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 SLC12A6Q9UHW9 1150 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 KLK13Q9UKR3 277 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 CEP83Q9Y592 693 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 CHD6Q8TD26 2715 aa11.28□□□□□ -0.6
PVT1-208ENST00000519481 A0A1B0GVT2 93 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 FLRT2O43155 660 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 THAP12O43422 761 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 GABBR2O75899 941 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 FSBPO95073 299 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
PVT1-208ENST00000519481 CALCAP01258 141 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 FTH1P19P0C7X4 201 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 SLC6A4P31645 630 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 NNMTP40261 264 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 CSKP41240 450 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 GPD2P43304 727 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.61
PVT1-208ENST00000519481 MORC3Q14149 939 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 MEA1Q16626 185 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 PTPRNQ16849 979 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 HLA-BQ31612 363 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 MS4A13Q5J8X5 152 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 BEND5Q7L4P6 421 aa11.27□□□□□ -0.61
PVT1-208ENST00000519481 RAB44Q7Z6P3 723 aaPredicted RBP11.27□□□□□ -0.61
PVT1-208ENST00000519481 CHSY1Q86X52 802 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms