RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 KIAA0907Q7Z7F0 614 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 SLC9A9Q8IVB4 645 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 SPACA3Q8IXA5 215 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 ZNF248Q8NDW4 579 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 OR2T34Q8NGX1 318 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 DHX58Q96C10 678 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 TMA16Q96EY4 203 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 USP28Q96RU2 1077 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 LGMNQ99538 433 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 IRX2Q9BZI1 471 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 UBXN6Q9BZV1 441 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 SLC39A2Q9NP94 309 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 FBXL12Q9NXK8 326 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 STOML2Q9UJZ1 356 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 FZD4Q9ULV1 537 aa11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 HBS1LQ9Y450 684 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-203ENST00000517667 HECTD1Q9ULT8 2610 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 HLA-DRAP01903 254 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 WNT1P04628 370 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 CKMT2P17540 419 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 GLDCP23378 1020 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 NASPP49321 788 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 CCR5P51681 352 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 GALCP54803 685 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 PCBP4P57723 403 aaKnown RBP11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 ST8SIA6P61647 398 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 DLG4P78352 724 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 CCDC173Q0VFZ6 552 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 SHBQ15464 509 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 C8orf34Q49A92 452 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 RAB41Q5JT25 222 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 PRAMEF14Q5SWL7 426 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 MPP7Q5T2T1 576 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 SFMBT2Q5VUG0 894 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 NCEH1Q6PIU2 408 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 FMNL3Q8IVF7 1028 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 TTC39CQ8N584 583 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 DCBLD1Q8N8Z6 715 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 NIF3L1Q9GZT8 377 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 DMAC2Q9NW81 257 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
TRAPPC9-203ENST00000517667 TLR4O00206 839 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 PPP6R2O75170 966 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 ZBED1O96006 694 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 CD58P19256 250 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 ACP1P24666 158 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 RXRGP48443 463 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 CST6Q15828 149 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 HNRNPA1L2Q32P51 320 aaKnown RBP11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 KDM1BQ8NB78 822 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 ZNF578Q96N58 590 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 OMDQ99983 421 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 CLMPQ9H6B4 373 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 UPF2Q9HAU5 1272 aaKnown RBP11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 FRMD4BQ9Y2L6 1034 aa11.93□□□□□ -0.5
TRAPPC9-203ENST00000517667 A0A1W2PP55 124 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 A0A1W2PR77 199 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 PDXKO00764 312 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 MAPK13O15264 365 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 SPTLC2O15270 562 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 IRAK2O43187 625 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 MAGEC1O60732 1142 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 RNASEH2AO75792 299 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 NR3C1P04150 777 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 ASLP04424 464 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 SYT1P21579 422 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 TKTL1P51854 596 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 NXPH1P58417 271 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 E2F1Q01094 437 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 INSM1Q01101 510 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 PKDCCQ504Y2 493 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 PM20D1Q6GTS8 502 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 SND1Q7KZF4 910 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 PIGZQ86VD9 579 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 ZC3H3Q8IXZ2 948 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 LSMEM2Q8N112 164 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 LINC00301Q8NCQ3 95 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 RNF139Q8WU17 664 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 SERAC1Q96JX3 654 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 HEXIM2Q96MH2 286 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 BLZF1Q9H2G9 400 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 EBF2Q9HAK2 575 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 SERGEFQ9UGK8 458 aa11.92□□□□□ -0.5
TRAPPC9-203ENST00000517667 TARSL2A2RTX5 802 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 TYW5A2RUC4 315 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 C10orf142B7Z368 130 aa11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 MID1O15344 667 aa11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 SIN3BO75182 1162 aa11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 ADH1BP00325 375 aa11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 CD70P32970 193 aa11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 NUDT1P36639 197 aa11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 OVGP1Q12889 678 aa11.91□□□□□ -0.5
TRAPPC9-203ENST00000517667 CUL4AQ13619 759 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms