RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	GMNN	O75496	209 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	CSDE1	O75534	798 aa	Known RBP	11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZBTB7A	O95365	584 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	MX2	P20592	715 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	AP3B2	Q13367	1082 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZBED5	Q49AG3	693 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	TIGD2	Q4W5G0	525 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	LYSMD3	Q7Z3D4	306 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	THNSL1	Q8IYQ7	743 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	USP33	Q8TEY7	942 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	LRRN4	Q8WUT4	740 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	PGBD4	Q96DM1	585 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	CCDC138	Q96M89	665 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	SERPINI1	Q99574	410 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	WDR18	Q9BV38	432 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	PNPLA3	Q9NST1	481 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582	SNX13	Q9Y5W8	968 aa		11.43	□□□□□ -0.58
PDCD6-210	ENST00000513582		F8VP50	259 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	RFPL1	O75677	317 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	P4HB	P07237	508 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	UNG	P13051	313 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZNF26	P17031	533 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	DSG3	P32926	999 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	RFC1	P35251	1148 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	RPS3A	P61247	264 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	ADAM17	P78536	824 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	MAMLD1	Q13495	774 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	LIN9	Q5TKA1	542 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	SNX32	Q86XE0	403 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	RCOR2	Q8IZ40	523 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	CADM3	Q8N126	398 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	LRTOMT	Q8WZ04	291 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	SLC29A1	Q99808	456 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	CALN1	Q9BXU9	219 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	CCDC68	Q9H2F9	335 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	FAM198A	Q9UFP1	575 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	ERGIC3	Q9Y282	383 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	POLRMT	O00411	1230 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	NEMP1	O14524	444 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	KCNH1	O95259	989 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	NEDD8	Q15843	81 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	PGS1	Q32NB8	556 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	ARL13B	Q3SXY8	428 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	KCNT1	Q5JUK3	1230 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	TTC33	Q6PID6	262 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	ATG14	Q6ZNE5	492 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	PODN	Q7Z5L7	613 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	BTLA	Q7Z6A9	289 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	UNC45B	Q8IWX7	931 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	IL31RA	Q8NI17	732 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	VTI1A	Q96AJ9	217 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	INO80B	Q9C086	356 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	DDX56	Q9NY93	547 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	COL4A1	P02462	1669 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	NFASC	O94856	1347 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	NOTO	A8MTQ0	251 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	MAP4	P27816	1152 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	GABRB3	P28472	473 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	CSE1L	P55060	971 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	TPTE	P56180	551 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	KLF10	Q13118	480 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	PMS2P3	Q13401	168 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	BRDT	Q58F21	947 aa	Predicted RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	FAM209A	Q5JX71	171 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	TEDDM1	Q5T9Z0	273 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	KCNT2	Q6UVM3	1135 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	DSEL	Q8IZU8	1212 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	DCAF4	Q8WV16	495 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	PPWD1	Q96BP3	646 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	TMA16	Q96EY4	203 aa	Known RBP	11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	CEP295NL	Q96MC4	621 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	SLC4A5	Q9BY07	1137 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	PALMD	Q9NP74	551 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	GNPTG	Q9UJJ9	305 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	PCDHGA3	Q9Y5H0	932 aa		11.42	□□□□□ -0.58
PDCD6-210	ENST00000513582	ABCA3	Q99758	1704 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ANKRD34B	A5PLL1	514 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	KRT75	O95678	551 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	AMH	P03971	560 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ITGAV	P06756	1048 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ADRB2	P07550	413 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	GNAO1	P09471	354 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	IL1R1	P14778	569 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	YWHAB	P31946	246 aa	Known RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	L1CAM	P32004	1257 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	GMPR	P36959	345 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	PTP4A2	Q12974	167 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	TRPC3	Q13507	836 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	CEACAM7	Q14002	265 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	MYBPC2	Q14324	1141 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	SLC15A2	Q16348	729 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	SNRNP35	Q16560	246 aa	Known RBP	11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	MTX3	Q5HYI7	312 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	FAXC	Q5TGI0	409 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ANKRD26P1	Q6NSI1	321 aa		11.41	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZFP1	Q6P2D0	407 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms