RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 WDFY3Q8IZQ1 3526 aa8.2□□□□□ -1.1
HMGCR-206ENST00000508070 LAMA5O15230 3695 aa8.2□□□□□ -1.1
HMGCR-206ENST00000508070 CKAP5Q14008 2032 aa8.2□□□□□ -1.1
HMGCR-206ENST00000508070 MYH10P35580 1976 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 A0A1W2PR77 199 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 ERVH48-1M5A8F1 160 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 MAPK13O15264 365 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 CUTAO60888 179 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 ZBED1O96006 694 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 WNT1P04628 370 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 CKMT2P17540 419 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 GLDCP23378 1020 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 PIK3CAP42336 1068 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 ST8SIA6P61647 398 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 RHDQ02161 417 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 TLE3Q04726 772 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 NCEH1Q6PIU2 408 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 PIGZQ86VD9 579 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 FMNL3Q8IVF7 1028 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 ANKRD52Q8NB46 1076 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 KDM1BQ8NB78 822 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 CCDC150Q8NCX0 1101 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 TTC17Q96AE7 1141 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 SLC6A18Q96N87 628 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 NEUROG2Q9H2A3 272 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
HMGCR-206ENST00000508070 APOBEC3GQ9HC16 384 aaKnown RBP8.19□□□□□ -1.1
HMGCR-206ENST00000508070 AASDHPPTQ9NRN7 309 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 FZD4Q9ULV1 537 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 FRMD4BQ9Y2L6 1034 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 COL5A1P20908 1838 aaPredicted RBP8.19□□□□□ -1.1
HMGCR-206ENST00000508070 PTPRQQ9UMZ3 2332 aa8.19□□□□□ -1.1
HMGCR-206ENST00000508070 ASH1LQ9NR48 2969 aaKnown RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 TARSL2A2RTX5 802 aaKnown RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 FAM47DPA6NHR8 397 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 C10orf142B7Z368 130 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 TLR4O00206 839 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 CBX4O00257 560 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 POLR2DO15514 142 aaKnown RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 BRINP1O60477 761 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 MAGEC1O60732 1142 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 NR3C1P04150 777 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 ASLP04424 464 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 CD58P19256 250 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 EPHA8P29322 1005 aaPredicted RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 NUDT1P36639 197 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 VAMP7P51809 220 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 TKTL1P51854 596 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 UCNP55089 124 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 CLDN6P56747 220 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 NXPH1P58417 271 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 CXADRP78310 365 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 ENPEPQ07075 957 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 CCDC173Q0VFZ6 552 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 BNIP3Q12983 259 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 CUL4BQ13620 913 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 KCNJ12Q14500 433 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 HNRNPA1L2Q32P51 320 aaKnown RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 TBC1D25Q3MII6 688 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 PKDCCQ504Y2 493 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 TAF1BQ53T94 588 aaPredicted RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 C1orf220Q5T0J3 134 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 ARHGAP17Q68EM7 881 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 SHC4Q6S5L8 630 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 PCSK4Q6UW60 755 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 SND1Q7KZF4 910 aaKnown RBP eCLIP8.18□□□□□ -1.11e-13■■■□□ 18.5
HMGCR-206ENST00000508070 SPACA3Q8IXA5 215 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 ZC3H3Q8IXZ2 948 aaKnown RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 LSMEM2Q8N112 164 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 DCBLD1Q8N8Z6 715 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 MFSD2AQ8NA29 543 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 ZNF248Q8NDW4 579 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 FIBINQ8TAL6 211 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 RNF139Q8WU17 664 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 AZIN2Q96A70 460 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 ZNF396Q96N95 335 aaPredicted RBP8.18□□□□□ -1.1
HMGCR-206ENST00000508070 OMDQ99983 421 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 NIF3L1Q9GZT8 377 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 BLZF1Q9H2G9 400 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 KCTD10Q9H3F6 313 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 EBF2Q9HAK2 575 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 CLCA2Q9UQC9 943 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 MTMR6Q9Y217 621 aa8.18□□□□□ -1.1
HMGCR-206ENST00000508070 LOC400499M0QZD8 3231 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 IRAK2O43187 625 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 SIN3BO75182 1162 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 RNASEH2AO75792 299 aaKnown RBP8.17□□□□□ -1.1
HMGCR-206ENST00000508070 YEATS4O95619 227 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 MT-CO3P00414 261 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 PDIA4P13667 645 aaKnown RBP8.17□□□□□ -1.1
HMGCR-206ENST00000508070 GOT1P17174 413 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 ACP1P24666 158 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 CASP1P29466 404 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 SLC8A1P32418 973 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 CD70P32970 193 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 AFMP43652 599 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 KCNH2Q12809 1159 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 OVGP1Q12889 678 aa8.17□□□□□ -1.1
HMGCR-206ENST00000508070 STK4Q13043 487 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms