RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ZDHHC11BP0C7U3 371 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
COL8A1-207ENST00000483969 KRT9P35527 623 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ATP5C1P36542 298 aaKnown RBP9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ACADSBP45954 432 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 TUBP50607 506 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 TKTL1P51854 596 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 SNX16P57768 344 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 SLC7A9P82251 487 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 APBA1Q02410 837 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 PRKCQQ04759 706 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 FCHO2Q0JRZ9 810 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 GRM2Q14416 872 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 PDCD11Q14690 1871 aaKnown RBP9.35□□□□□ -0.91
COL8A1-207ENST00000483969 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
COL8A1-207ENST00000483969 SYCP1Q15431 976 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 SLC44A4Q53GD3 710 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 RAB41Q5JT25 222 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 DPY19L2P1Q6NXN4 242 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF765Q7L2R6 523 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 CCDC186Q7Z3E2 898 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL8A1-207ENST00000483969 FAM71AQ8IYT1 594 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 SIX6OS1Q8N1H7 587 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF276Q8N554 614 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 KIAA1958Q8N8K9 716 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 CSGALNACT1Q8TDX6 532 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 SLC35F5Q8WV83 523 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 DNASE1L2Q92874 299 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 USP13Q92995 863 aaPredicted RBP9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ERGIC2Q96RQ1 377 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 CDK5RAP1Q96SZ6 601 aaKnown RBP9.35□□□□□ -0.91
COL8A1-207ENST00000483969 HSD3B7Q9H2F3 369 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 PDCL3Q9H2J4 239 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 MFSD1Q9H3U5 465 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 CLIC5Q9NZA1 410 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 GMIPQ9P107 970 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ARHGAP26Q9UNA1 814 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 VWA8A3KMH1 1905 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ANK1P16157 1881 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 MBL2P11226 248 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 RARGP13631 454 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 GLULP15104 373 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 TCF3P15923 654 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 ITPKAP23677 461 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 STAT1P42224 750 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 GPD2P43304 727 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 MLLT6P55198 1093 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 POLR2FP61218 127 aaKnown RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 AMPD2Q01433 879 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 PDGFRLQ15198 375 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 LRSAM1Q6UWE0 723 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 APTXQ7Z2E3 356 aaKnown RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 GPRIN1Q7Z2K8 1008 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 CACNA2D4Q7Z3S7 1137 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 LUZP1Q86V48 1076 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 FMNL3Q8IVF7 1028 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 SCML4Q8N228 414 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 GOLGA1Q92805 767 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 SECISBP2LQ93073 1101 aaKnown RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 RSPRY1Q96DX4 576 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 NOX5Q96PH1 765 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 SPAG5Q96R06 1193 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 SLC22A12Q96S37 553 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 NELL2Q99435 816 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 ZSWIM1Q9BR11 485 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 NAA15Q9BXJ9 866 aaKnown RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 RNF38Q9H0F5 515 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 LHX5Q9H2C1 402 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 SMOC2Q9H3U7 446 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 TSPY26PQ9H489 355 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 C8orf33Q9H7E9 229 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 CNGB3Q9NQW8 809 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 GKN1Q9NS71 199 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 FAM207AQ9NSI2 230 aaPredicted RBP9.34□□□□□ -0.91
COL8A1-207ENST00000483969 SIK3Q9Y2K2 1263 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 CEP83Q9Y592 693 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 XIRP2A4UGR9 3374 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 SCN1AP35498 2009 aa9.34□□□□□ -0.91
COL8A1-207ENST00000483969 TRIP11Q15643 1979 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 ATG2AQ2TAZ0 1938 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 A0A1W2PQC6 194 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 A0A1W2PQH9 124 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 LEFTY2O00292 366 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 TULP2O00295 520 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 MAN2B1O00754 1011 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 SLC9A3R1O14745 358 aaPredicted RBP9.33□□□□□ -0.92
COL8A1-207ENST00000483969 COCHO43405 550 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 TLR5O60602 858 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 ICMTO60725 284 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 FBXO21O94952 628 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 PRAMEF12O95522 483 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 OLFM2O95897 454 aa9.33□□□□□ -0.92
COL8A1-207ENST00000483969 CALCAP01258 141 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms