RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 RRM1P23921 792 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 HLA-FP30511 346 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 SDC4P31431 198 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 RDXP35241 583 aaKnown RBP13.86□□□□□ -0.19
SSR1-208ENST00000483409 RFC1P35251 1148 aaPredicted RBP13.86□□□□□ -0.19
SSR1-208ENST00000483409 WASP42768 502 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 NRLP54845 237 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 RAB6CQ53S08 254 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 EOGTQ5NDL2 527 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 BRMS1LQ5PSV4 323 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 MPP7Q5T2T1 576 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 SH3PXD2AQ5TCZ1 1133 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 RNF43Q68DV7 783 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
SSR1-208ENST00000483409 CIR1Q86X95 450 aaPredicted RBP13.86□□□□□ -0.19
SSR1-208ENST00000483409 FAM131BQ86XD5 332 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 VSTM4Q8IW00 320 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 MFN1Q8IWA4 741 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 CARNMT1Q8N4J0 409 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 ATRIPQ8WXE1 791 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 NELL1Q92832 810 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 MCEEQ96PE7 176 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 ACOX2Q99424 681 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.86□□□□□ -0.19
SSR1-208ENST00000483409 FAM126AQ9BYI3 521 aaPredicted RBP13.86□□□□□ -0.19
SSR1-208ENST00000483409 IRX2Q9BZI1 471 aaPredicted RBP13.86□□□□□ -0.19
SSR1-208ENST00000483409 CIPCQ9C0C6 399 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 SIK2Q9H0K1 926 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 RAB6CQ9H0N0 254 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 TMPRSS4Q9NRS4 437 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 ARHGEF38Q9NXL2 777 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 GGA2Q9UJY4 613 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 STARD13Q9Y3M8 1113 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 PCDHGA2Q9Y5H1 932 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 SNX10Q9Y5X0 201 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 HS3ST4Q9Y661 456 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 CKAP5Q14008 2032 aa13.86□□□□□ -0.19
SSR1-208ENST00000483409 MUC22E2RYF6 1773 aaPredicted RBP13.86□□□□□ -0.19
SSR1-208ENST00000483409 TCRBV5S1A1TA0A578 114 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 I6L893 689 aaPredicted RBP13.85□□□□□ -0.19
SSR1-208ENST00000483409 LUC7L3O95232 432 aaKnown RBP13.85□□□□□ -0.19
SSR1-208ENST00000483409 F9P00740 461 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 FTLP02792 175 aaPredicted RBP13.85□□□□□ -0.19
SSR1-208ENST00000483409 HNRNPLP14866 589 aaKnown RBP eCLIP13.85□□□□□ -0.19
SSR1-208ENST00000483409 GPD1P21695 349 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 CD70P32970 193 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 CDH18Q13634 790 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 AUHQ13825 339 aaKnown RBP13.85□□□□□ -0.19
SSR1-208ENST00000483409 TRIM14Q14142 442 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 CRY1Q16526 586 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 CCDC14Q49A88 953 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 HSF5Q4G112 596 aaPredicted RBP13.85□□□□□ -0.19
SSR1-208ENST00000483409 TMEM215Q68D42 235 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 PPP1R2P3Q6NXS1 205 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 FBXL22Q6P050 247 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 SARM1Q6SZW1 724 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 TMEM92Q6UXU6 159 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 BNIPLQ7Z465 357 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 TRMT11Q7Z4G4 463 aaKnown RBP13.85□□□□□ -0.19
SSR1-208ENST00000483409 CHPFQ8IZ52 775 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 ZBTB44Q8NCP5 570 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 TSTD1Q8NFU3 115 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 KCNV2Q8TDN2 545 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 SORCS1Q8WY21 1168 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 ERLEC1Q96DZ1 483 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 TRIM5Q9C035 493 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 ELOVL2Q9NXB9 296 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 CACNA2D2Q9NY47 1150 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 ADAMTS1Q9UHI8 967 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 VANGL2Q9ULK5 521 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 PAXBP1Q9Y5B6 917 aa13.85□□□□□ -0.19
SSR1-208ENST00000483409 BZW2Q9Y6E2 419 aaKnown RBP13.85□□□□□ -0.19
SSR1-208ENST00000483409 USP34Q70CQ2 3546 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 RTN2O75298 545 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 APBB3O95704 486 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 PABPC1P11940 636 aaKnown RBP13.84□□□□□ -0.19
SSR1-208ENST00000483409 GZMAP12544 262 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 HOXB2P14652 356 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 NTSR1P30989 418 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 PTPN9P43378 593 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 IRAK1P51617 712 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 RPL7AP62424 266 aaKnown RBP13.84□□□□□ -0.19
SSR1-208ENST00000483409 LMAN2Q12907 356 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 SRSF5Q13243 272 aaKnown RBP13.84□□□□□ -0.19
SSR1-208ENST00000483409 MTA1Q13330 715 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 RABGAP1LQ5R372 815 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 ANO7Q6IWH7 933 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 DCUN1D2Q6PH85 259 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 CHST9Q7L1S5 443 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 C14orf80Q86SX3 495 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 LONP2Q86WA8 852 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 GAS2L3Q86XJ1 694 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 CCDC117Q8IWD4 279 aaPredicted RBP13.84□□□□□ -0.19
SSR1-208ENST00000483409 AHI1Q8N157 1196 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 CAMKK1Q8N5S9 505 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 FIBINQ8TAL6 211 aa13.84□□□□□ -0.19
SSR1-208ENST00000483409 FAM172AQ8WUF8 416 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms