RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 AVPR1AP37288 418 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PGFP49763 221 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 DNA2P51530 1060 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PLTPP55058 493 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 VCPP55072 806 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 GUCY1A3Q02108 690 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 GPR17Q13304 367 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 STILQ15468 1287 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 LPAL2Q16609 132 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 FAM78AQ5JUQ0 283 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 TMEM31Q5JXX7 168 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PPP1R15BQ5SWA1 713 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 KCTD16Q68DU8 428 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 HIBCHQ6NVY1 386 aaPredicted RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 FOXR1Q6PIV2 292 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 ELMSAN1Q6PJG2 1045 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 TSSK4Q6SA08 328 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 ARHGEF18Q6ZSZ5 1173 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 DDX42Q86XP3 938 aaKnown RBP eCLIP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 CACUL1Q86Y37 369 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 MIB1Q86YT6 1006 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 C10orf67Q8IYJ2 551 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 CCDC197Q8NCU1 140 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SUSD6Q92537 303 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 RNF25Q96BH1 459 aaPredicted RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SEC16BQ96JE7 1060 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 LRFN3Q9BTN0 628 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 NIF3L1Q9GZT8 377 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 GOLPH3Q9H4A6 298 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 EBF3Q9H4W6 596 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 RXFP1Q9HBX9 757 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PLK2Q9NYY3 685 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 AFF4Q9UHB7 1163 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SLC24A2Q9UI40 661 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SNX24Q9Y343 169 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 NR2E1Q9Y466 385 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PCDHB5Q9Y5E4 795 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 NCOR2Q9Y618 2525 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PDCD11Q14690 1871 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 TMEM191CA6NGB0 347 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 OAZ2O95190 189 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 OAS1P00973 400 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 KRT7P08729 469 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PTPN1P18031 435 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 FLT3P36888 993 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 ATP1A2P50993 1020 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 RNASE9P60153 205 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 XRCC4Q13426 336 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 MAMLD1Q13495 774 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 RIPK1Q13546 671 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 AUHQ13825 339 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SLC29A2Q14542 456 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 TRADDQ15628 312 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 HEATR6Q6AI08 1181 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SLC44A3Q8N4M1 653 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 NAT16Q8N8M0 369 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 RBBP8NLQ8NC74 664 aaPredicted RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 B3GALNT2Q8NCR0 500 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 CABS1Q96KC9 395 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 OSBPL8Q9BZF1 889 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 DNAI2Q9GZS0 605 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 XYLT2Q9H1B5 865 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PCDH9Q9HC56 1237 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 C11orf16Q9NQ32 467 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 GKN1Q9NS71 199 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 INTS9Q9NV88 658 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 DZANK1Q9NVP4 752 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 EURLQ9NYK6 297 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 ADAM22Q9P0K1 906 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SAMD15Q9P1V8 674 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 FNIP2Q9P278 1114 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 SMG5Q9UPR3 1016 aaKnown RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 MTF2Q9Y483 593 aaPredicted RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.93□□□□□ -1.62
EDEM3-203ENST00000439962 CACNA1GO43497 2377 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CHD8Q9HCK8 2581 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 DNALI1O14645 258 aaPredicted RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 TRDMT1O14717 391 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 PRPF4O43172 522 aaKnown RBP eCLIP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 HNRNPCL1O60812 293 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 SPAG6O75602 509 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ATP5HO75947 161 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ABLIM3O94929 683 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 GSTA2P09210 222 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 LCP1P13796 627 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CYP3A5P20815 502 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 PCSK1P29120 753 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 SCNN1AP37088 669 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 PNPLA4P41247 253 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 GABRB2P47870 512 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 SNX16P57768 344 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 TAF10Q12962 218 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF211Q13398 564 aaPredicted RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 INTS6LQ5JSJ4 861 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 GPRIN1Q7Z2K8 1008 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 CPLX4Q7Z7G2 160 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 YAF2Q8IY57 180 aa4.92□□□□□ -1.62
EDEM3-203ENST00000439962 DCP1BQ8IZD4 617 aaKnown RBP4.92□□□□□ -1.62
EDEM3-203ENST00000439962 ZDHHC14Q8IZN3 488 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms