RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 HPS4Q9NQG7 708 aa17.08■□□□□ 0.32
CTDSPL-204ENST00000435525 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTDSPL-204ENST00000435525 TRIM10Q9UDY6 481 aa17.08■□□□□ 0.32
CTDSPL-204ENST00000435525 XPO7Q9UIA9 1087 aaKnown RBP17.08■□□□□ 0.32
CTDSPL-204ENST00000435525 VANGL2Q9ULK5 521 aa17.08■□□□□ 0.32
CTDSPL-204ENST00000435525 DOCK6Q96HP0 2047 aa17.08■□□□□ 0.32
CTDSPL-204ENST00000435525 NUP210Q8TEM1 1887 aaPredicted RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 CCDC66A2RUB6 948 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 MIF4GDA9UHW6 222 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 TRDMT1O14717 391 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 CREB3O43889 395 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 TBL1XO60907 577 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 CLDN11O75508 207 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 PALMO75781 387 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 ALADP13716 330 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 TNNT1P13805 278 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 TYRP14679 529 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 VCPP55072 806 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 TPI1P60174 286 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 CDH18Q13634 790 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 PDK2Q15119 407 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 SLC44A4Q53GD3 710 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 RAB6CQ53S08 254 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 PPP6R3Q5H9R7 873 aaPredicted RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 FBXL22Q6P050 247 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 TMEM25Q86YD3 366 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 SUGP1Q8IWZ8 645 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 ARFGAP1Q8N6T3 406 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 ZYG11BQ9C0D3 744 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 RAB6CQ9H0N0 254 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 TRMT1Q9NXH9 659 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 GTSE1Q9NYZ3 720 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 PPARGC1AQ9UBK2 798 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 WNT16Q9UBV4 365 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 SALL4Q9UJQ4 1053 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 MRPS17Q9Y2R5 130 aaKnown RBP17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 PIAS3Q9Y6X2 628 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 ANAPC1Q9H1A4 1944 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 OBSL1O75147 1896 aa17.07■□□□□ 0.32
CTDSPL-204ENST00000435525 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 A0A1B0GVM2 712 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 TCAF2A6NFQ2 919 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 H0Y626 953 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 EEF2KO00418 725 aaKnown RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 FGF10O15520 208 aaPredicted RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 NARSO43776 548 aaKnown RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 RARAP10276 462 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 SLC6A4P31645 630 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 EIF2DP41214 584 aaKnown RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 CDH4P55283 916 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 CDH6P55285 790 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 SLC25A11Q02978 314 aaKnown RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 PRKCQQ04759 706 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 ZNF177Q13360 481 aaPredicted RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 E2F5Q15329 346 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 SMTNL2Q2TAL5 461 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 CHST9Q7L1S5 443 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 CCDC26Q8TAB7 109 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 TTC8Q8TAM2 541 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 BHMTQ93088 406 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 RCOR3Q9P2K3 495 aaPredicted RBP17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 DEC1Q9P2X7 70 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 MUTYHQ9UIF7 546 aa17.06■□□□□ 0.32
CTDSPL-204ENST00000435525 GRID2IPA4D2P6 1211 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 ARNTLO00327 626 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 DCXO43602 365 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 PENKP01210 267 aaPredicted RBP17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 KRT1P04264 644 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 IL1R2P27930 398 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 EPHB2P29323 1055 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 GJA4P35212 333 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 HCAR3P49019 387 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 MLF2Q15773 248 aaPredicted RBP17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 DPYSL2Q16555 572 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 KCNT1Q5JUK3 1230 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 DAB2IPQ5VWQ8 1189 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 ZNF852Q6ZMS4 543 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 MFN1Q8IWA4 741 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 CCAR2Q8N163 923 aaKnown RBP17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 CARNMT1Q8N4J0 409 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 LRRC57Q8N9N7 239 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 RBM41Q96IZ5 413 aaKnown RBP17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 NECAB3Q96P71 396 aaPredicted RBP17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 PEBP4Q96S96 227 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 MAK16Q9BXY0 300 aaKnown RBP17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 ARHGEF3Q9NR81 526 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 TMPRSS4Q9NRS4 437 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 HEBP1Q9NRV9 189 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 DNAJC17Q9NVM6 304 aaKnown RBP17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 GPATCH2LQ9NWQ4 482 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 PYCARDQ9ULZ3 195 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 DENND4CQ5VZ89 1909 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 DOCK8Q8NF50 2099 aa17.05■□□□□ 0.32
CTDSPL-204ENST00000435525 IGLV3-10A0A075B6K4 115 aa17.04■□□□□ 0.32
CTDSPL-204ENST00000435525 LRRD1A4D1F6 860 aa17.04■□□□□ 0.32
CTDSPL-204ENST00000435525 DRGXA6NNA5 263 aa17.04■□□□□ 0.32
CTDSPL-204ENST00000435525 SPECC1L-ADORA2AF8WAN1 911 aa17.04■□□□□ 0.32
CTDSPL-204ENST00000435525 CACNG3O60359 315 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms