RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 TYMPP19971 482 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 GRK2P25098 689 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 MMP13P45452 471 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 HECTD3Q5T447 861 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 GPR142Q7Z601 462 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 KCNMB4Q86W47 210 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 MAP4K3Q8IVH8 894 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 CXorf40AQ8TE69 158 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 DPY30Q9C005 99 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 ABCB1P08183 1280 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 EIF4BP23588 611 aaKnown RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 NPY2RP49146 381 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 MRPL48Q96GC5 212 aaKnown RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 CCT7Q99832 543 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 TBL1YQ9BQ87 522 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 RNF19AQ9NV58 838 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 KANSL1LA0AUZ9 987 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 MPOP05164 745 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 PTPN1P18031 435 aaKnown RBP15.33■□□□□ 0.05
UBE3B-202ENST00000342494 HDCP19113 662 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 SEC24CP53992 1094 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 ILF2Q12905 390 aaKnown RBP15.33■□□□□ 0.05
UBE3B-202ENST00000342494 NOMO2Q5JPE7 1267 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 WSCD1Q658N2 575 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 TDRD5Q8NAT2 981 aaKnown RBP15.33■□□□□ 0.05
UBE3B-202ENST00000342494 ACTRT1Q8TDG2 376 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 REPS1Q96D71 796 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 VCPIP1Q96JH7 1222 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 POLR1EQ9GZS1 481 aaKnown RBP15.33■□□□□ 0.05
UBE3B-202ENST00000342494 PORCNQ9H237 461 aa15.33■□□□□ 0.05
UBE3B-202ENST00000342494 CDC42EP4Q9H3Q1 356 aaKnown RBP15.33■□□□□ 0.05
UBE3B-202ENST00000342494 ADH1AP07327 375 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 CLTBP09497 229 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 GRK4P32298 578 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 PEX5P50542 639 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 NTRK3Q16288 839 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 INSCQ1MX18 579 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 NOL9Q5SY16 702 aaKnown RBP15.33■□□□□ 0.04
UBE3B-202ENST00000342494 ZNF470Q6ECI4 717 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 LLGL2Q6P1M3 1020 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 TTC33Q6PID6 262 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-202ENST00000342494 SYNPO2Q9UMS6 1093 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 A0A088AWK7 358 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 CCT8L1PA6NM43 557 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 XPO1O14980 1071 aaKnown RBP15.33■□□□□ 0.04
UBE3B-202ENST00000342494 HMGCRP04035 888 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 ZNF10P21506 573 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-202ENST00000342494 GRIN3AQ8TCU5 1115 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 PPP1R13LQ8WUF5 828 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 BCL9O00512 1426 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 GJC2Q5T442 439 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-202ENST00000342494 ZSWIM2Q8NEG5 633 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 BBS4Q96RK4 519 aa15.33■□□□□ 0.04
UBE3B-202ENST00000342494 E5RJQ4 531 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 AGRPO00253 132 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 ZBTB14O43829 449 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 VAPBO95292 243 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 MAD2L1Q13257 205 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-202ENST00000342494 CYP2A13Q16696 494 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 NECAB2Q7Z6G3 386 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 FGD2Q7Z6J4 655 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 BBS2Q9BXC9 721 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 OSBPL6Q9BZF3 934 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 EML1O00423 815 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 MT-CO1P00395 513 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 AMD1P17707 334 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 ATP6V1C1P21283 382 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 GSTA3Q16772 222 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 KIAA0895Q8NCT3 520 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 HELQQ8TDG4 1101 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 ANKRD49Q8WVL7 239 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 DNMT3LQ9UJW3 386 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 SKIV2L2P42285 1042 aaKnown RBP15.32■□□□□ 0.04
UBE3B-202ENST00000342494 ZNF135P52742 658 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-202ENST00000342494 AQP5P55064 265 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 SERPINA13PQ6UXR4 307 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 BNC2Q6ZN30 1099 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-202ENST00000342494 DPP10Q8N608 796 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 NMRAL1Q9HBL8 299 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 SLC24A2Q9UI40 661 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 WDR27A2RRH5 827 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 KLHL41O60662 606 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 ATP6V1B2P21281 511 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 MGAT1P26572 445 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 NDUFV1P49821 464 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-202ENST00000342494 KIAA0319LQ8IZA0 1049 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 SPATA20Q8TB22 786 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 MAGEC3Q8TD91 643 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 PNMA5Q96PV4 448 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 MIR1-1HGQ9H1L0 117 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 TMEM134Q9H6X4 195 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 FAM198AQ9UFP1 575 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 UBDO15205 165 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 PGAM1P18669 254 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 TARSP26639 723 aaKnown RBP15.32■□□□□ 0.04
UBE3B-202ENST00000342494 GP5P40197 560 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 DEFA1P59665 94 aa15.32■□□□□ 0.04
UBE3B-202ENST00000342494 DEFA3P59666 94 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms