RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TMEM161AQ9NX61 479 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 KIAA1324LA8MWY0 1029 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 L7N2F9 121 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZMPSTE24O75844 475 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ANGPTL1O95841 491 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PAHP00439 452 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 MYL2P10916 166 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 STAT6P42226 847 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 VAMP2P63027 116 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 TCIRG1Q13488 830 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 BMP2KLQ5H9B9 411 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ATG14Q6ZNE5 492 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC25A41Q8N5S1 370 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 IP6K1Q92551 441 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 BTBD9Q96Q07 612 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CLPBQ9H078 707 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 HPS4Q9NQG7 708 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PLAAQ9Y263 795 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 RIPK2O43353 540 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ORC5O43913 435 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 MYO1DO94832 1006 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 FADS2O95864 444 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 KITLGP21583 273 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 TARSP26639 723 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 HTR2AP28223 471 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 AP2S1P53680 142 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 DGKDQ16760 1214 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 BEND6Q5SZJ8 279 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR8H3Q8N146 312 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 MAGEB6Q8N7X4 407 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 C3orf49Q96BT1 292 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 RNFT2Q96EX2 444 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PIGSQ96S52 555 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PKP4Q99569 1192 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLITRK6Q9H5Y7 841 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 TFCP2L1Q9NZI6 479 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 NFU1Q9UMS0 254 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 TNNQ9UQP3 1299 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CACNA1CQ13936 2221 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 NPEPPSP55786 919 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 OCRLQ01968 901 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SCARB2Q14108 478 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 C4orf46Q504U0 113 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PLET1Q6UQ28 207 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZBTB33Q86T24 672 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 GAS2L3Q86XJ1 694 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCDC60Q8IWA6 550 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCDC116Q8IYX3 515 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 INO80EQ8NBZ0 244 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 IRF2BPLQ9H1B7 796 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 RNF41Q9H4P4 317 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 TPT1P8Q9HAU6 139 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 NKTRP30414 1462 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 GATCO43716 136 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCNQ4P56696 695 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR2B6P58173 313 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CLEC16AQ2KHT3 1053 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 KLHL26Q53HC5 615 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 LIX1LQ8IVB5 337 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 GPALPP1Q8IXQ4 340 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CYGBQ8WWM9 190 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 APBB2Q92870 758 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF594Q96JF6 807 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 LRFN5Q96NI6 719 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 LPIN3Q9BQK8 851 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 DDX47Q9H0S4 455 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC2A9Q9NRM0 540 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 A0A075B6Q4 140 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PITPNM1O00562 1244 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ETS2P15036 469 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ETV3P41162 512 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 FBXO47Q5MNV8 452 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 MIER2Q8N344 545 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 MCOLN3Q8TDD5 553 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PYROXD1Q8WU10 500 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 TMX3Q96JJ7 454 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 FERD3LQ96RJ6 166 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PPA2Q9H2U2 334 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 EPB41L4AQ9HCS5 686 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SHOC2Q9UQ13 582 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 NME7Q9Y5B8 376 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ALG5Q9Y673 324 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 MED7O43513 233 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 KPNA6O60684 536 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CAV3P56539 151 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCNA1P78396 465 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 CHRNDQ07001 517 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 FAM83EQ2M2I3 478 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 FGD3Q5JSP0 725 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 PPIP5K1Q6PFW1 1433 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SCUBE1Q8IWY4 988 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR8H1Q8NGG4 311 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 NSMCE3Q96MG7 304 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 YTHDC2Q9H6S0 1430 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 MAB21L2Q9Y586 359 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SPAG6O75602 509 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 UQCRC1P31930 480 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ATXN1P54253 815 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 LRRC66Q68CR7 880 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 IFNL3Q8IZI9 196 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms