RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 LTB4R2Q9NPC1 389 aa4.98□□□□□ -1.61
LINC00540-201ENST00000611481 TESQ9UGI8 421 aaKnown RBP4.98□□□□□ -1.61
LINC00540-201ENST00000611481 TTC3P53804 2025 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 A0A087X0B3 334 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 UNC119BA6NIH7 251 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 N4BP1O75113 896 aaKnown RBP4.97□□□□□ -1.61
LINC00540-201ENST00000611481 RFPL3O75679 317 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 ZNF286BP0CG31 522 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 TXNP10599 105 aaKnown RBP4.97□□□□□ -1.61
LINC00540-201ENST00000611481 RBP3P10745 1247 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 TDGF1P13385 188 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 MGAT1P26572 445 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 FLT3P36888 993 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 KRTAP10-9P60411 292 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 CFHR1Q03591 330 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 MCL1Q07820 350 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 MPP3Q13368 585 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 MVPQ14764 893 aaKnown RBP4.97□□□□□ -1.61
LINC00540-201ENST00000611481 MLF2Q15773 248 aaPredicted RBP4.97□□□□□ -1.61
LINC00540-201ENST00000611481 C21orf62-AS1Q17RA5 79 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 LETM2Q2VYF4 491 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 ZBTB41Q5SVQ8 909 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 PIK3R6Q5UE93 754 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 DAB2IPQ5VWQ8 1189 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 TCEAL6Q6IPX3 200 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 UBE2R2Q712K3 238 aaPredicted RBP4.97□□□□□ -1.61
LINC00540-201ENST00000611481 CHPFQ8IZ52 775 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 DEFB124Q8NES8 71 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 OR10H5Q8NGA6 315 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 MDM1Q8TC05 714 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 SCFD2Q8WU76 684 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 TCEAL3Q969E4 200 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 MYADMQ96S97 322 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 DDX23Q9BUQ8 820 aaKnown RBP4.97□□□□□ -1.61
LINC00540-201ENST00000611481 EDEM2Q9BV94 578 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 KATNAL1Q9BW62 490 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 TEX101Q9BY14 249 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.97□□□□□ -1.61
LINC00540-201ENST00000611481 CYP39A1Q9NYL5 469 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 TLK1Q9UKI8 766 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 FRMD4BQ9Y2L6 1034 aa4.97□□□□□ -1.61
LINC00540-201ENST00000611481 CACNA1FO60840 1977 aa4.96□□□□□ -1.61
LINC00540-201ENST00000611481 SHISA7A6NL88 538 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CBX4O00257 560 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CAPN9O14815 690 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CIAO1O76071 339 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 SEC24DO94855 1032 aaPredicted RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ARIH2O95376 493 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 SCGB1D2O95969 90 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 GHRP10912 638 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 EGR2P11161 476 aaPredicted RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ALAS1P13196 640 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 EPCAMP16422 314 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CPEP16870 476 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CSRP1P21291 193 aaKnown RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ALDH5A1P51649 535 aaPredicted RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 GUCY2FP51841 1108 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 OAZ1P54368 228 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 GPC5P78333 572 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 MXRA7P84157 204 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CALD1Q05682 793 aaKnown RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 TP53BP2Q13625 1128 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 PDCD4Q53EL6 469 aaKnown RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 FNDC3BQ53EP0 1204 aaKnown RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 EFCAB12Q6NXP0 572 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 BTNL9Q6UXG8 535 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 GPR149Q86SP6 731 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 SYT12Q8IV01 421 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CHCHD4Q8N4Q1 142 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 COLGALT1Q8NBJ5 622 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ATL2Q8NHH9 583 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ASB10Q8WXI3 467 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 MRPS27Q92552 414 aaKnown RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ATP6V0A1Q93050 837 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CLDN23Q96B33 292 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CLUHP3Q96NS8 147 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 NAP1L4Q99733 375 aaKnown RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ADAM2Q99965 735 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 SENP7Q9BQF6 1050 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 OXSMQ9NWU1 459 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 ADD3Q9UEY8 706 aaKnown RBP4.96□□□□□ -1.62
LINC00540-201ENST00000611481 MAPRE3Q9UPY8 281 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 PAXBP1Q9Y5B6 917 aa4.96□□□□□ -1.62
LINC00540-201ENST00000611481 CACNA1EQ15878 2313 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 SPAARA0A1B0GVQ0 90 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 E2F8A0AVK6 867 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 C17orf102A2RUQ5 167 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 CAPN8A6NHC0 703 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 B5MCH6 92 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 HAS3O00219 553 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 NCAM2O15394 837 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 NRP2O60462 931 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 DNAJC8O75937 253 aaPredicted RBP4.95□□□□□ -1.62
LINC00540-201ENST00000611481 EPN2O95208 641 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 SPDEFO95238 335 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 NDUFB10O96000 172 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 F2P00734 622 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 STAG3L1P0CL83 205 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 CYP2D6P10635 497 aa4.95□□□□□ -1.62
LINC00540-201ENST00000611481 XPAP23025 273 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms