RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 SPATA13Q96N96 652 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 TRIM6Q9C030 488 aaPredicted RBP16.56■□□□□ 0.24
CNOT2-209ENST00000548159 BATF3Q9NR55 127 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 RPL26L1Q9UNX3 145 aaKnown RBP16.56■□□□□ 0.24
CNOT2-209ENST00000548159 RNF103O00237 685 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 PIRO00625 290 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 TPP1O14773 563 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 CREB3O43889 395 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 SULT1E1P49888 294 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 PDE1CQ14123 709 aaPredicted RBP16.56■□□□□ 0.24
CNOT2-209ENST00000548159 HIC1Q14526 733 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 ANO7Q6IWH7 933 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 CRLF3Q8IUI8 442 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 CCNYQ8ND76 341 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 SMC1BQ8NDV3 1235 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 RILPQ96NA2 401 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 NMRK1Q9NWW6 199 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 RNF181Q9P0P0 153 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 FZD10Q9ULW2 581 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 DERAQ9Y315 318 aa16.56■□□□□ 0.24
CNOT2-209ENST00000548159 PRR5-ARHGAP8B1AHC4 643 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 CAPN9O14815 690 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 ALDH1A2O94788 518 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 PDHA1P08559 390 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 ACAT1P24752 427 aaKnown RBP16.55■□□□□ 0.24
CNOT2-209ENST00000548159 PSMB4P28070 264 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 ARL4AP40617 200 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 MATKP42679 507 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 ARHGAP8P85298 464 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 THOC5Q13769 683 aaKnown RBP16.55■□□□□ 0.24
CNOT2-209ENST00000548159 BLMHQ13867 455 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 N4BP2L1Q5TBK1 243 aaPredicted RBP16.55■□□□□ 0.24
CNOT2-209ENST00000548159 SYPL2Q5VXT5 272 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 C4orf22Q6V702 233 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 TRIM42Q8IWZ5 723 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 SHKBP1Q8TBC3 707 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 SH3TC2Q8TF17 1288 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 GCOM2Q9BZD3 368 aaPredicted RBP16.55■□□□□ 0.24
CNOT2-209ENST00000548159 SDR42E2A6NKP2 422 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 PSMG1O95456 288 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 AMHP03971 560 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 MLH1P40692 756 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 RPL34P49207 117 aaKnown RBP16.55■□□□□ 0.24
CNOT2-209ENST00000548159 SNX16P57768 344 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 NIPAL4Q0D2K0 466 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 CCDC6Q16204 474 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 SNX30Q5VWJ9 437 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 NOTUMQ6P988 496 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 PACS1Q6VY07 963 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 OR6J1Q8NGC5 347 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 FAM161BQ96MY7 647 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 PRDM12Q9H4Q4 367 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 XPNPEP3Q9NQH7 507 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 ZNF358Q9NW07 568 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 SYBUQ9NX95 663 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 DONSONQ9NYP3 566 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 CACNG4Q9UBN1 327 aa16.55■□□□□ 0.24
CNOT2-209ENST00000548159 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
CNOT2-209ENST00000548159 KCNK1O00180 336 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 USP12O75317 370 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 SMNDC1O75940 238 aaKnown RBP eCLIP16.54■□□□□ 0.24
CNOT2-209ENST00000548159 ERVK-10P10266 1014 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 ATP6V1C1P21283 382 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 YY1P25490 414 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 SERPINB9P50453 376 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 NME3Q13232 169 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 TIFABQ6ZNK6 161 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 HFE2Q6ZVN8 426 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 OSTM1Q86WC4 334 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 NME8Q8N427 588 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 RNF169Q8NCN4 708 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 DNAJC9Q8WXX5 260 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 CCDC106Q9BWC9 280 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 WWP1Q9H0M0 922 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 SNX25Q9H3E2 840 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 WASF2Q9Y6W5 498 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 FAM72CH0Y354 149 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 PRKCGP05129 697 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 ARRB2P32121 409 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 WASHC5Q12768 1159 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 SLC25A52Q3SY17 297 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 DUSP28Q4G0W2 176 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 FAM72AQ5TYM5 149 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 FAM91A1Q658Y4 838 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 STEAP4Q687X5 459 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 MBLAC2Q68D91 279 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 FAM72DQ6L9T8 149 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 LRRC8BQ6P9F7 803 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 STRADAQ7RTN6 431 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 FAM72BQ86X60 149 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 ZNF567Q8N184 647 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 PPP1R14CQ8TAE6 165 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 ADAM32Q8TC27 787 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 RNF139Q8WU17 664 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 THAP1Q9NVV9 213 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 MORF4L1Q9UBU8 362 aa16.54■□□□□ 0.24
CNOT2-209ENST00000548159 UBQLN1Q9UMX0 589 aaKnown RBP16.54■□□□□ 0.24
CNOT2-209ENST00000548159 PIN4Q9Y237 131 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms