RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 VCPIP1Q96JH7 1222 aa17.21■□□□□ 0.34
SCARB1-205ENST00000538291 BATF3Q9NR55 127 aa17.21■□□□□ 0.34
SCARB1-205ENST00000538291 UBA2Q9UBT2 640 aaPredicted RBP17.21■□□□□ 0.34
SCARB1-205ENST00000538291 HPSEQ9Y251 543 aa17.21■□□□□ 0.34
SCARB1-205ENST00000538291 ZNF839A8K0R7 811 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 UBDO15205 165 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 BAIAP3O94812 1187 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 ADCYAP1R1P41586 468 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 SKIV2L2P42285 1042 aaKnown RBP17.2■□□□□ 0.34
SCARB1-205ENST00000538291 NR2C2P49116 596 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 SRLQ86TD4 932 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 DEFB106AQ8N104 65 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 ADAM2Q99965 735 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 SNX13Q9Y5W8 968 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-205ENST00000538291 CNBD2Q96M20 576 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 INHBEP58166 350 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 KDM7AQ6ZMT4 941 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 GLT6D1Q7Z4J2 308 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 LUZP2Q86TE4 346 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 CYP4Z2PQ8N1L4 340 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 FBXO39Q8N4B4 442 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 HNRNPLLQ8WVV9 542 aaKnown RBP17.2■□□□□ 0.34
SCARB1-205ENST00000538291 LENG9Q96B70 501 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 OSBPL6Q9BZF3 934 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 TM9SF1O15321 606 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 TPH1P17752 444 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 IGFBP4P22692 258 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 ZNF135P52742 658 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-205ENST00000538291 CES5AQ6NT32 575 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 CAMKK1Q8N5S9 505 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 NMRAL1Q9HBL8 299 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 SHOC2Q9UQ13 582 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
SCARB1-205ENST00000538291 CPS1P31327 1500 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 PIK3CDO00329 1044 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 SLITRK3O94933 977 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 UBTFL6P0CB48 400 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-205ENST00000538291 GRTP1Q5TC63 336 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 ANKRD49Q8WVL7 239 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 IDI2Q9BXS1 227 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 GRK4P32298 578 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 GP5P40197 560 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 CNTN2Q02246 1040 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 BMPR2Q13873 1038 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 FBXW10Q5XX13 1052 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 OTOP1Q7RTM1 612 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 PALMDQ9NP74 551 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 STK39Q9UEW8 545 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 DUSP10Q9Y6W6 482 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 FAM220BPB1ANY3 271 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 SLC9A3R1O14745 358 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-205ENST00000538291 CCT8P50990 548 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 GSTA3Q16772 222 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 ARMC12Q5T9G4 340 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 FKBP1CQ5VVH2 108 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 CCDC149Q6ZUS6 474 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 NECAB2Q7Z6G3 386 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 FBXO25Q8TCJ0 367 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.19■□□□□ 0.341e-7■■■■□ 24.4
SCARB1-205ENST00000538291 RGS5O15539 181 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 KLHL41O60662 606 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
SCARB1-205ENST00000538291 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■□□□□ 8
SCARB1-205ENST00000538291 CRABP2P29373 138 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 NUP107P57740 925 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 SLC6A3Q01959 620 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 CEP78Q5JTW2 689 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 CEP41Q9BYV8 373 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 MRPL17Q9NRX2 175 aaKnown RBP17.19■□□□□ 0.34
SCARB1-205ENST00000538291 KLHL20Q9Y2M5 609 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 MROH7Q68CQ1 1323 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 PGAM1P18669 254 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 SERPINB1P30740 379 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 FBXL19Q6PCT2 694 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 ATG16L2Q8NAA4 619 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 PPP1R16AQ96I34 528 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 POPDC2Q9HBU9 364 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 PAPOLBQ9NRJ5 636 aaKnown RBP17.19■□□□□ 0.34
SCARB1-205ENST00000538291 FAM153AQ9UHL3 310 aa17.19■□□□□ 0.34
SCARB1-205ENST00000538291 TK2O00142 265 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 LGALS2P05162 132 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 FCGR1AP12314 374 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 AMPD1P23109 780 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 PTPRMP28827 1452 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 THOP1P52888 689 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 SETMARQ53H47 684 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 REXO1L1PQ8IX06 675 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 MSRAQ9UJ68 235 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 KATNA1O75449 491 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 ACADSP16219 412 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 SOX6P35712 828 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 RAD23AP54725 363 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 XRCC4Q13426 336 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
SCARB1-205ENST00000538291 AGKQ53H12 422 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 DOK6Q6PKX4 331 aa17.18■□□□□ 0.34
SCARB1-205ENST00000538291 SCUBE3Q8IX30 993 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms