RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ZBBXA8MT70 800 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 PSMD12O00232 456 aaPredicted RBP4.15□□□□□ -1.74
SOX6-217ENST00000533870 PLK4O00444 970 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 COBLO75128 1261 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 STAU1O95793 577 aaKnown RBP4.15□□□□□ -1.74
SOX6-217ENST00000533870 TGFB3P10600 412 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 PORP16435 677 aaPredicted RBP4.15□□□□□ -1.74
SOX6-217ENST00000533870 JAK1P23458 1154 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 PMLP29590 882 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 GJA8P48165 433 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 CLCN5P51795 746 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 MMRN1Q13201 1228 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 ARMCX4Q5H9R4 360 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 CCNYL2Q5T2Q4 361 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 TMEM63BQ5T3F8 832 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 ARHGEF16Q5VV41 709 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 TRUB1Q8WWH5 349 aaKnown RBP4.15□□□□□ -1.74
SOX6-217ENST00000533870 RORBQ92753 470 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 CGREF1Q99674 301 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 SYT15Q9BQS2 421 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 NT5C1AQ9BXI3 368 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 CPNE5Q9HCH3 593 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 TRIM39Q9HCM9 518 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 ARL8BQ9NVJ2 186 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 SNTG2Q9NY99 539 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 PTTG3PQ9NZH4 202 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 SALL4Q9UJQ4 1053 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 UBIAD1Q9Y5Z9 338 aa4.15□□□□□ -1.74
SOX6-217ENST00000533870 IGKV6D-41A0A0C4DH26 115 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 M0QYV0 167 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 GSTA4O15217 222 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 ZSCAN9O15535 394 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 SCELO95171 688 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 KRT19P08727 400 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 LBPP18428 481 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 CD97P48960 835 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 USP46P62068 366 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 TUBA1BP68363 451 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 HPCAP84074 193 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 KCTD2Q14681 263 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 VPS72Q15906 364 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 PPP1R15BQ5SWA1 713 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 N4BP2L1Q5TBK1 243 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 OLFML2BQ68BL8 750 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 TUBA1AQ71U36 451 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 GALNT13Q8IUC8 556 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 BBS7Q8IWZ6 715 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 TDRD5Q8NAT2 981 aaKnown RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 SMYD1Q8NB12 490 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 GALNT6Q8NCL4 622 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 PPHLN1Q8NEY8 458 aaKnown RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 HSPH1Q92598 858 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 ZNF669Q96BR6 464 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 FAM213AQ9BRX8 229 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 SYT11Q9BT88 431 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 PCIF1Q9H4Z3 704 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 TNPO3Q9Y5L0 923 aaKnown RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 IRS2Q9Y4H2 1338 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 BCL9O00512 1426 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 TESPA1A2RU30 521 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 STX7O15400 261 aaKnown RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 BCAS2O75934 225 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 SLC7A1P30825 629 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 YWHABP31946 246 aaKnown RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 ETFBP38117 255 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 CASP4P49662 377 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 NCKAP1LP55160 1127 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 FAAP100Q0VG06 881 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 GALNT1Q10472 559 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 ABRQ12979 859 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 SLC12A1Q13621 1099 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 PDE1CQ14123 709 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 GK3PQ14409 553 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 USP10Q14694 798 aaKnown RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 EMC2Q15006 297 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 TRIM60Q495X7 471 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 ANKS6Q68DC2 871 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 NIPAL1Q6NVV3 410 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 RAPH1Q70E73 1250 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 BRINP3Q76B58 766 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 KCNK18Q7Z418 384 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 STRA8Q7Z7C7 330 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 SNX32Q86XE0 403 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 NCAPG2Q86XI2 1143 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 CBWD2Q8IUF1 395 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 EID3Q8N140 333 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 SMG8Q8ND04 991 aaKnown RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 ZNF347Q96SE7 839 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 SDCBP2Q9H190 292 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 SIAEQ9HAT2 523 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 NMRAL1Q9HBL8 299 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 HOXC10Q9NYD6 342 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 EURLQ9NYK6 297 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 STMN3Q9NZ72 180 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 LEF1Q9UJU2 399 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 PSME2Q9UL46 239 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 MTF2Q9Y483 593 aaPredicted RBP4.15□□□□□ -1.75
SOX6-217ENST00000533870 SNX13Q9Y5W8 968 aa4.15□□□□□ -1.75
SOX6-217ENST00000533870 LOC100653049A0A140TA62 436 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms