RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 DGKEP52429 567 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 SATB1Q01826 763 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 MYO1EQ12965 1108 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 BIRC2Q13490 618 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 C9orf50Q5SZB4 431 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 VWA1Q6PCB0 445 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 UNC13DQ70J99 1090 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 SRLQ86TD4 932 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 SDR16C5Q8N3Y7 309 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 OR2C3Q8N628 320 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 ATP11CQ8NB49 1132 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 PRSS33Q8NF86 280 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 MYCBPAPQ8TBZ2 947 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 LPIN2Q92539 896 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 GJA10Q969M2 543 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 FAM136AQ96C01 138 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 RBM17Q96I25 401 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 CCDC138Q96M89 665 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 RPS6KC1Q96S38 1066 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 STK31Q9BXU1 1019 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 TPSD1Q9BZJ3 242 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 KLK15Q9H2R5 256 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 SERHLQ9NQF3 203 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 FNIP2Q9P278 1114 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 RALYQ9UKM9 306 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 PADI4Q9UM07 663 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 SSX2IPQ9Y2D8 614 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 TBC1D30Q9Y2I9 924 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 MRPS17Q9Y2R5 130 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 ATP6V0A2Q9Y487 856 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 TCF20Q9UGU0 1960 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 SPTBN4Q9H254 2564 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 DDX60LQ5H9U9 1706 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 PFASO15067 1338 aa4.21□□□□□ -1.74
TOPBP1-208ENST00000511439 ANKRD11Q6UB99 2663 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 CHD6Q8TD26 2715 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 LOC102723971A0A1B0GUV8 181 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 A0A1W2PPC4 97 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 MGST3O14880 152 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 MPPED1O15442 326 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 RASSF9O75901 435 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 C1QL1O75973 258 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 BTF3P20290 206 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 TNFSF4P23510 183 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 SERPINB3P29508 390 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 IL6STP40189 918 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 CARSP49589 748 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 KRT17Q04695 432 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 PRKCZQ05513 592 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ITIH3Q06033 890 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 MORC3Q14149 939 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 E2F2Q14209 437 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 BRD3Q15059 726 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 NPY5RQ15761 445 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 INSCQ1MX18 579 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 FAM209BQ5JX69 171 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ARHGAP40Q5TG30 622 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 KLHDC7AQ5VTJ3 777 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ICE2Q659A1 982 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 KIAA0895LQ68EN5 471 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 HIBCHQ6NVY1 386 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 TOGARAM2Q6ZUX3 1019 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 RNF44Q7L0R7 432 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 MORC1Q86VD1 984 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 LIX1LQ8IVB5 337 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 FAM186BQ8IYM0 893 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 IPCEF1Q8WWN9 437 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 BRI3BPQ8WY22 251 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 PMM1Q92871 262 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 CLMNQ96JQ2 1002 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 RIPOR3Q96MK2 946 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 PPP1R9BQ96SB3 815 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 MPHOSPH6Q99547 160 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 TIMP4Q99727 224 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ACTRT3Q9BYD9 372 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 DHX36Q9H2U1 1008 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 CXorf36Q9H7Y0 433 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ZCCHC17Q9NP64 241 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 NLRC4Q9NPP4 1024 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 TERF2IPQ9NYB0 399 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 DNMT3BQ9UBC3 853 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ARPP21Q9UBL0 812 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 MID2Q9UJV3 735 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ITGB1BP2Q9UKP3 347 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 COG5Q9UP83 839 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 SCAF8Q9UPN6 1271 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 ENTPD2Q9Y5L3 495 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 TAF1P21675 1872 aa4.2□□□□□ -1.74
TOPBP1-208ENST00000511439 COL1A1P02452 1464 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 DDX60Q8IY21 1712 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 CCL15-CCL14A0A0B4J2E2 113 aa4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 LRRC3CA6NJW4 275 aa4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 CLCA1A8K7I4 914 aa4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 PPM1DO15297 605 aa4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 YY2O15391 372 aa4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 THAP12O43422 761 aa4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 DCXO43602 365 aa4.19□□□□□ -1.74
TOPBP1-208ENST00000511439 NCK2O43639 380 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms