RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CC2D1BQ5T0F9 858 aaKnown RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 B3GNT9Q6UX72 402 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 ZDHHC24Q6UX98 284 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 MEPCEQ7L2J0 689 aaKnown RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 IL31RAQ8NI17 732 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 PPP1R35Q8TAP8 253 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 JPH3Q8WXH2 748 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 ZBTB45Q96K62 511 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 LYZL4Q96KX0 146 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 LRGUKQ96M69 825 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 RHOBTB2Q9BYZ6 727 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 BRINP2Q9C0B6 783 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 DNMT3BQ9UBC3 853 aaKnown RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 TTC21AQ8NDW8 1320 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 CCDC7Q96M83 1385 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 KDM6AO15550 1401 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 FER1L6Q2WGJ9 1857 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 SLX4Q8IY92 1834 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 NRXN2Q9P2S2 1712 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 CLIC1O00299 241 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 EXOC5O00471 708 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 FYB1O15117 783 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 CD3EAPO15446 510 aaKnown RBP3.82□□□□□ -1.8
PTCD3-218ENST00000493430 CCP110O43303 1012 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 CNOT3O75175 753 aaKnown RBP3.82□□□□□ -1.8
PTCD3-218ENST00000493430 TULP3O75386 442 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 ALDH1L1O75891 902 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 CD19P15391 556 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 SLC7A1P30825 629 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 THBS4P35443 961 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 THBS3P49746 956 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 GATMP50440 423 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 HSF1Q00613 529 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 TIAL1Q01085 375 aaKnown RBP eCLIP3.82□□□□□ -1.85e-7■■■■□ 26.5
PTCD3-218ENST00000493430 PTPROQ16827 1216 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 C9orf47Q6ZRZ4 202 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 KCTD20Q7Z5Y7 419 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 UBE2Q1Q7Z7E8 422 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 ARFGAP1Q8N6T3 406 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 C12orf76Q8N812 135 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-218ENST00000493430 OR56A3Q8NH54 315 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 ZFYVE19Q96K21 471 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 TAAR9Q96RI9 348 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 TRMOQ9BU70 441 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 NKX1-2Q9UD57 310 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-218ENST00000493430 ZNF180Q9UJW8 692 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 CACNA1IQ9P0X4 2223 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 MYH3P11055 1940 aa3.82□□□□□ -1.8
PTCD3-218ENST00000493430 DDX60Q8IY21 1712 aaKnown RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 COL4A1P02462 1669 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 KCPQ6ZWJ8 1503 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 NCAPD2Q15021 1401 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 BRD4O60885 1362 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 MBD3L4A6NDZ8 208 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 MBD3L3A6NE82 208 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 FAM90A8PA6NJQ4 464 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 TBX3O15119 743 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 IGSF3O75054 1194 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 RASSF9O75901 435 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 FAM90A13PP0C7W8 464 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 FAM90A24PP0C7X0 464 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 PTDSS1P48651 473 aaKnown RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 PGDP52209 483 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 PIN1Q13526 163 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 STIM1Q13586 685 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 MFSD13AQ14CX5 517 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 SLC9C1Q4G0N8 1177 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 NPNTQ6UXI9 565 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 MAEAQ7L5Y9 396 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 MICU3Q86XE3 530 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 CHPFQ8IZ52 775 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 ZBTB34Q8NCN2 500 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 ZNF548Q8NEK5 533 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 MPLKIPQ8TAP9 179 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 MAML1Q92585 1016 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 WDYHV1Q96HA8 205 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 ATP6V0A4Q9HBG4 840 aa3.81□□□□□ -1.8
PTCD3-218ENST00000493430 NOP58Q9Y2X3 529 aaKnown RBP3.81□□□□□ -1.8
PTCD3-218ENST00000493430 SMG6Q86US8 1419 aaKnown RBP3.8□□□□□ -1.8
PTCD3-218ENST00000493430 FLT4P35916 1363 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 KIF7Q2M1P5 1343 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 ZNF646O15015 1829 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-218ENST00000493430 CAPN8A6NHC0 703 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 A8MVJ9 347 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 B4DGG1 531 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 H7C4K7 107 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 PYCARD-AS1I3L0S3 204 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 RRP9O43818 475 aaKnown RBP3.8□□□□□ -1.8
PTCD3-218ENST00000493430 TUSC2O75896 110 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 PIAS2O75928 621 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 CD63P08962 238 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 HGFP14210 728 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 KLRC1P26715 233 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 TACR3P29371 465 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 AMPHP49418 695 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 ITGA8P53708 1063 aa3.8□□□□□ -1.8
PTCD3-218ENST00000493430 SUMO3P55854 103 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-218ENST00000493430 NANOS2P60321 138 aaKnown RBP3.8□□□□□ -1.8
PTCD3-218ENST00000493430 YPEL5P62699 121 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms