RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 GPD1P21695 349 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 BDNFP23560 247 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 IGFBP6P24592 240 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 GRIK1P39086 918 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 TUFMP49411 452 aaKnown RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 RGS7P49802 495 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 NDUFV1P49821 464 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 MAP3K7CLP57077 242 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 DLX2Q07687 328 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 MESDQ14696 234 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 SMAD2Q15796 467 aaKnown RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 HADHQ16836 314 aaKnown RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 WHAMMP3Q1A5X7 153 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 SLC39A12Q504Y0 691 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 RAB41Q5JT25 222 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 RTP2Q5QGT7 225 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 CYP4A22Q5TCH4 519 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 LRRC38Q5VT99 294 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 PMF1Q6P1K2 205 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 PAQR9Q6ZVX9 377 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 NT5DC3Q86UY8 548 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 ARHGAP18Q8N392 663 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 NIPA2Q8N8Q9 360 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 EDAQ92838 391 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 RPGRIP1Q96KN7 1286 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 MCEEQ96PE7 176 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 NAP1L3Q99457 506 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 CNPY3Q9BT09 278 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 C11orf84Q9BUA3 381 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 FBXO44Q9H4M3 255 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 L2HGDHQ9H9P8 463 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 FNIP2Q9P278 1114 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 AFF4Q9UHB7 1163 aaKnown RBP6.93□□□□□ -1.3
VAMP3-202ENST00000470357 CYTH4Q9UIA0 394 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 CDC23Q9UJX2 597 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 STAP1Q9ULZ2 295 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 SNX12Q9UMY4 172 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 ALG6Q9Y672 507 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 PLXNA3P51805 1871 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 VPS13AQ96RL7 3174 aa6.93□□□□□ -1.3
VAMP3-202ENST00000470357 TMEM110-MUSTN1A8MSY1 372 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CLDN5O00501 218 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PAPSS1O43252 624 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 MBTPS2O43462 519 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PSTPIP1O43586 416 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 FTCDO95954 541 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ZBED1O96006 694 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ATP1A1P05023 1023 aaKnown RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 KRT7P08729 469 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CTSAP10619 480 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 COMTP21964 271 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PSMA2P25787 234 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CTNNA2P26232 953 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 SDC4P31431 198 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ELF1P32519 619 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CTNNB1P35222 781 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 BMPR1AP36894 532 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PBX3P40426 434 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PAFAH1B1P43034 410 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PTPN9P43378 593 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 TKTL1P51854 596 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ZNF143P52747 638 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 YWHAZP63104 245 aaKnown RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ADIGQ0VDE8 80 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PLD1Q13393 1074 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 SMC1AQ14683 1233 aaKnown RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ODF2Q5BJF6 829 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CCDC181Q5TID7 509 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 SHISA2Q6UWI4 295 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 OLFML1Q6UWY5 402 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ADAMTSL4Q6UY14 1074 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 FAM183BPQ6ZVS7 135 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 RTL10Q7L3V2 364 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 BEND5Q7L4P6 421 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 POLNQ7Z5Q5 900 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 TMEM173Q86WV6 379 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 DNAAF5Q86Y56 855 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 RHOT1Q8IXI2 618 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 VPS52Q8N1B4 723 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CEP112Q8N8E3 955 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ZNF461Q8TAF7 563 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 MAIP1Q8WWC4 291 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 HES6Q96HZ4 224 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 SPATA17Q96L03 361 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 SMOQ99835 787 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 TLR10Q9BXR5 811 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 EMILIN2Q9BXX0 1053 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CARD9Q9H257 536 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 RXFP1Q9HBX9 757 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 DDX56Q9NY93 547 aaKnown RBP6.92□□□□□ -1.3
VAMP3-202ENST00000470357 TMEM59LQ9UK28 342 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 PCDHA3Q9Y5H8 950 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 MRFAP1Q9Y605 127 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 IRAK3Q9Y616 596 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 CDY1Q9Y6F8 540 aa6.92□□□□□ -1.3
VAMP3-202ENST00000470357 ZFHX4Q86UP3 3567 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms