RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ATG7O95352 703 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 CHRNGP07510 517 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 TXNP10599 105 aaKnown RBP12.84□□□□□ -0.35
CDH3-202ENST00000429102 ARRB2P32121 409 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 SLC18A1P54219 525 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 INHBEP58166 350 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 COG7P83436 770 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 ROR2Q01974 943 aaKnown RBP12.84□□□□□ -0.35
CDH3-202ENST00000429102 TRMT5Q32P41 509 aaKnown RBP12.84□□□□□ -0.35
CDH3-202ENST00000429102 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 SPATA24Q86W54 205 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 CHSY1Q86X52 802 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 SIGLEC10Q96LC7 697 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 CATSPER2Q96P56 530 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 SLC39A10Q9ULF5 831 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 CNTN6Q9UQ52 1028 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 HNRNPCL1O60812 293 aaKnown RBP12.83□□□□□ -0.35
CDH3-202ENST00000429102 CSPG5O95196 566 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 ALDOAP04075 364 aaKnown RBP12.83□□□□□ -0.35
CDH3-202ENST00000429102 ZNF460Q14592 562 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 KRT72Q14CN4 511 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 NRF1Q16656 503 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 DNAL1Q4LDG9 190 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 SLC9B1Q4ZJI4 515 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 ZNF618Q5T7W0 954 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 IER5Q5VY09 327 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 ZPBP2Q6X784 338 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 RNF111Q6ZNA4 994 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 RPS27LQ71UM5 84 aaKnown RBP12.83□□□□□ -0.35
CDH3-202ENST00000429102 CDKL2Q92772 493 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 DPP3Q9NY33 737 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 HOXC10Q9NYD6 342 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 GGA3Q9NZ52 723 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 SNX10Q9Y5X0 201 aa12.83□□□□□ -0.35
CDH3-202ENST00000429102 SOCS7O14512 581 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 LIN7AO14910 233 aaPredicted RBP12.83□□□□□ -0.36
CDH3-202ENST00000429102 CHADO15335 359 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 CILPO75339 1184 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 LRRC23Q53EV4 343 aaPredicted RBP12.83□□□□□ -0.36
CDH3-202ENST00000429102 SH2D5Q6ZV89 423 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 TTC30AQ86WT1 665 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 TRIM42Q8IWZ5 723 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 ST13P4Q8IZP2 240 aaPredicted RBP12.83□□□□□ -0.36
CDH3-202ENST00000429102 ACVR1CQ8NER5 493 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 FLAD1Q8NFF5 587 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 LENG8Q96PV6 779 aaPredicted RBP12.83□□□□□ -0.36
CDH3-202ENST00000429102 OR52B2Q96RD2 323 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 CDRT15Q96T59 188 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 CCDC106Q9BWC9 280 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 GRIP2Q9C0E4 1043 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 ATXN3LQ9H3M9 355 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 S100A14Q9HCY8 104 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 STK32BQ9NY57 414 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 CAPN14A8MX76 684 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 CLDN5O00501 218 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 HDAC4P56524 1084 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 TMED1Q13445 227 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 TEDDM1Q5T9Z0 273 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 STRA8Q7Z7C7 330 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 DHDDSQ86SQ9 333 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 GATA6Q92908 595 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 MFSD3Q96ES6 412 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 CITO14578 2027 aa12.83□□□□□ -0.36
CDH3-202ENST00000429102 ACKR2O00590 384 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 PFDN1O60925 122 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 PYGLP06737 847 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 INSRRP14616 1297 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 IDH3AP50213 366 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 NME5P56597 212 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 LBRQ14739 615 aaKnown RBP12.82□□□□□ -0.36
CDH3-202ENST00000429102 STILQ15468 1287 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 SLC10A6Q3KNW5 377 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 FAM47CQ5HY64 1035 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 SNX32Q86XE0 403 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 GALNT15Q8N3T1 639 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 NIPA2Q8N8Q9 360 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 RAB3IL1Q8TBN0 382 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 UBE2OQ9C0C9 1292 aaKnown RBP12.82□□□□□ -0.36
CDH3-202ENST00000429102 COG4Q9H9E3 785 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 PPCSQ9HAB8 311 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 ANLNQ9NQW6 1124 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 SNTG2Q9NY99 539 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 LTFP02788 710 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 ITGA2BP08514 1039 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 TSPAN8P19075 237 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 MPSTP25325 297 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 LMO2P25791 158 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 SOWAHAQ2M3V2 549 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 PACS1Q6VY07 963 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
CDH3-202ENST00000429102 ICA1LQ8NDH6 482 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 MAPK15Q8TD08 544 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 ADA2Q9NZK5 511 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 CDH22Q9UJ99 828 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 POMPQ9Y244 141 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 RNF103O00237 685 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 TGDSO95455 350 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms