RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 PMF1Q6P1K2 205 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 PRSS55Q6UWB4 352 aaPredicted RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 TMC5Q6UXY8 1006 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 C3orf62Q6ZUJ4 267 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 RD3Q7Z3Z2 195 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 LINC00523Q86TU6 105 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 MMGT1Q8N4V1 131 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 CALML6Q8TD86 181 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 FAM136AQ96C01 138 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 B3GALT6Q96L58 329 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 BBS2Q9BXC9 721 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 TBC1D13Q9NVG8 400 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 AAR2Q9Y312 384 aaKnown RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 ABHD14A-ACY1A0A1B0GW23 586 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 TARSL2A2RTX5 802 aaKnown RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 MBLAC1A4D2B0 266 aaPredicted RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 MEIS3P2A8K0S8 358 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 ERBB2P04626 1255 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 RABGGTBP53611 331 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 ITGA8P53708 1063 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 ENPEPQ07075 957 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 LBRQ14739 615 aaKnown RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 CCDC38Q502W7 563 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 ATG16L1Q676U5 607 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 KCNT2Q6UVM3 1135 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 PPFIBP2Q8ND30 876 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 AGR3Q8TD06 166 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 C2orf49Q9BVC5 232 aaPredicted RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 OSGEPL1Q9H4B0 414 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 RWDD3Q9Y3V2 267 aa10.02□□□□□ -0.81
CMSS1-201ENST00000421999 RP1L1Q8IWN7 2480 aaPredicted RBP10.02□□□□□ -0.81
CMSS1-201ENST00000421999 QSER1Q2KHR3 1735 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 FAM155AB1AL88 458 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 PYGLP06737 847 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 RARAP10276 462 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CSF2RAP15509 400 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CDC25CP30307 473 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 RGS4P49798 205 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 C1QTNF8P60827 252 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 GPM6BQ13491 265 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CCDC85BQ15834 202 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 PREPLQ4J6C6 727 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 C1orf220Q5T0J3 134 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CCNI2Q6ZMN8 369 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 WDR75Q8IWA0 830 aaKnown RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CHPFQ8IZ52 775 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 RNF217Q8TC41 542 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 ELMO2Q96JJ3 720 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 TM6SF2Q9BZW4 377 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CCDC195A0A1B0GUA6 201 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 RBAK-RBAKDNI3L0D1 243 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 EDN1P05305 212 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CFHP08603 1231 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 TGM2P21980 687 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 HADHAP40939 763 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 POU5F1Q01860 360 aaKnown RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 MON1AQ86VX9 555 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CREG2Q8IUH2 290 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 TMEM130Q8N3G9 435 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 LPCAT1Q8NF37 534 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 MCRS1Q96EZ8 462 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 STAMBPL1Q96FJ0 436 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 PCED1BQ96HM7 432 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 LHX5Q9H2C1 402 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CNTN3Q9P232 1028 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CPSF2Q9P2I0 782 aaKnown RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 SFMBT1Q9UHJ3 866 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 STK38LQ9Y2H1 464 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 HCRTO43612 131 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 MNAT1P51948 309 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 KCTD19Q17RG1 926 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 VSTM1Q6UX27 236 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CRLF3Q8IUI8 442 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 NAT16Q8N8M0 369 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 AUTS2Q8WXX7 1259 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 ING5Q8WYH8 240 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 TSSK1BQ9BXA7 367 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 XAB2Q9HCS7 855 aaKnown RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 SAE1Q9UBE0 346 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 A8MX80 341 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 PDE2AO00408 941 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 DDHD2O94830 711 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 C8AP07357 584 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 ZNF143P52747 638 aaPredicted RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 MAGOHP61326 146 aaKnown RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 SGCGQ13326 291 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 KIF19Q2TAC6 998 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CNKSR3Q6P9H4 555 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 DSG4Q86SJ6 1040 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 MYCBPAPQ8TBZ2 947 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 KCNK16Q96T55 309 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 PNKPQ96T60 521 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 DDX23Q9BUQ8 820 aaKnown RBP10.01□□□□□ -0.81
CMSS1-201ENST00000421999 FICDQ9BVA6 458 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 ADGRE3Q9BY15 652 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 CNGB3Q9NQW8 809 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 SUN2Q9UH99 717 aa10.01□□□□□ -0.81
CMSS1-201ENST00000421999 ZSCAN5CA6NGD5 496 aaPredicted RBP10□□□□□ -0.81
CMSS1-201ENST00000421999 VGLL3A8MV65 326 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms