RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 MTMR9Q96QG7 549 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 YIPF3Q9GZM5 350 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 KCNMB3Q9NPA1 279 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 KRCC1Q9NPI7 259 aaPredicted RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 UBA2Q9UBT2 640 aaPredicted RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 RAD54BQ9Y620 910 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CHD4Q14839 1912 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CYP2C18P33260 490 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 BTKQ06187 659 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 PRKAA1Q13131 559 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 ACOX1Q15067 660 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 DUSP28Q4G0W2 176 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CDKAL1Q5VV42 579 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CAPRIN2Q6IMN6 1127 aaKnown RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 C3orf20Q8ND61 904 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 ACTRT1Q8TDG2 376 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 APBB2Q92870 758 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 TMEM159Q96B96 161 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CELF6Q96J87 481 aaKnown RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 MAML3Q96JK9 1138 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 RAD18Q9NS91 495 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 AKAP7Q9P0M2 348 aaPredicted RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 PRDM4Q9UKN5 801 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 GIT1Q9Y2X7 761 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 PTCH2Q9Y6C5 1203 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 PLIN4Q96Q06 1357 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 ZNF839A8K0R7 811 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CYTH3O43739 400 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CSH1P0DML2 217 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CSH2P0DML3 217 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CCDC130P13994 396 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 DARSP14868 501 aaKnown RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 ZNF7P17097 686 aaPredicted RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 GLRA2P23416 452 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 GPC1P35052 558 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 HECTD3Q5T447 861 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 NT5DC3Q86UY8 548 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 ARHGEF19Q8IW93 802 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CCDC33Q8N5R6 958 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 HNRNPLLQ8WVV9 542 aaKnown RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 ZBTB45Q96K62 511 aaPredicted RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 MARCH2Q9P0N8 246 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 FBXO10Q9UK96 956 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 COL1A2P08123 1366 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 PJA2O43164 708 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 FGRP09769 529 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 H2AFXP16104 143 aaPredicted RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 HTRA3P83110 453 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 SLC29A2Q14542 456 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 STRA8Q7Z7C7 330 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 VAT1Q99536 393 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 SH3GL3Q99963 347 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CTNNAL1Q9UBT7 734 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 DNMT3LQ9UJW3 386 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 NCF1BA6NI72 391 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 NCF1CA8MVU1 366 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 FGF10O15520 208 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 AKAP10O43572 662 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 MTA2O94776 668 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 OR56A5P0C7T3 313 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 NCF1P14598 390 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 HLA-DPA1P20036 260 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 NPY2RP49146 381 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 IRX1P78414 480 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 C1orf186Q6ZWK4 172 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 MTSS1LQ765P7 747 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 TRMT11Q7Z4G4 463 aaKnown RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 IFNEQ86WN2 208 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 PXYLP1Q8TE99 480 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 JADE3Q92613 823 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 TADA1Q96BN2 335 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 TEPSINQ96N21 525 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 PACSIN1Q9BY11 444 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 GPAMQ9HCL2 828 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 SEPT3Q9UH03 358 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 VPS51Q9UID3 782 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 ACOT9Q9Y305 439 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 ANKRD63C9JTQ0 380 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 PSMD12O00232 456 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 TBC1D4O60343 1298 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 USP17L7P0C7H9 530 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 CHI3L1P36222 383 aaPredicted RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 HALP42357 657 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 STX5Q13190 355 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 DYNC1I2Q13409 638 aaKnown RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 FBXW10Q5XX13 1052 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 AGGF1Q8N302 714 aaeCLIP8.65□□□□□ -1.023e-6■□□□□ 10.9
UBR4-206ENST00000419533 PPTC7Q8NI37 304 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 TUBGCP3Q96CW5 907 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 TMEM121Q9BTD3 319 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 BATF3Q9NR55 127 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 AHSPQ9NZD4 102 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 RBPJLQ9UBG7 517 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 MRPS23Q9Y3D9 190 aaKnown RBP8.65□□□□□ -1.02
UBR4-206ENST00000419533 TBC1D3BA6NDS4 549 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 PDZK1P1A8MUH7 402 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 AIM2O14862 343 aa8.65□□□□□ -1.02
UBR4-206ENST00000419533 TLL1O43897 1013 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms