RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PTPN11Q06124 597 aaPredicted RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 FAXCQ5TGI0 409 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 TTI2Q6NXR4 508 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 IZUMO2Q6UXV1 221 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 DHFR2Q86XF0 187 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 OR56A4Q8NGH8 313 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 DLG3Q92796 817 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 C9orf16Q9BUW7 83 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 FBXO44Q9H4M3 255 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 SAR1AQ9NR31 198 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 BTN3A3O00478 584 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 ATP9AO75110 1047 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 POU1F1P28069 291 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 HALP42357 657 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 NPTX2P47972 431 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 FCHO2Q0JRZ9 810 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TROAPQ12815 778 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 NR6A1Q15406 480 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 AGKQ53H12 422 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 SCARA3Q6AZY7 606 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 B3GAT3O94766 335 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 SERPINF2P08697 491 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 ZNF7P17097 686 aaPredicted RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 TTKP33981 857 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 CACNA2D1P54289 1103 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 ACOT1Q86TX2 421 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TMEM237Q96Q45 408 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TMEM79Q9BSE2 394 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 MTMR12Q9C0I1 747 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 VPS28Q9UK41 221 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 NDUFAF1Q9Y375 327 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 MEI4A8MW99 385 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 AHCYL1O43865 530 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 SMNDC1O75940 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLCS-201ENST00000336648 ZBTB7AO95365 584 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 URODP06132 367 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 STAT5AP42229 794 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 IL5RAQ01344 420 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 SLC34A1Q06495 639 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 GIT2Q14161 759 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 PTPAQ15257 358 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 MAPK11Q15759 364 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 KCNT1Q5JUK3 1230 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 PCNX4Q63HM2 1172 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TYW3Q6IPR3 259 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 CACTIN-AS1Q8N1I8 211 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 PCSK9Q8NBP7 692 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 APOPT1Q96IL0 206 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 EHD4Q9H223 541 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 ZNF624Q9P2J8 865 aaPredicted RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 LRCH1Q9Y2L9 728 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TPD52L2O43399 206 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 ATG7O95352 703 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 GRK4P32298 578 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 PPIDQ08752 370 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 NFIAQ12857 509 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TRAF3Q13114 568 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 ERMARDQ5T6L9 678 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 PALB2Q86YC2 1186 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 EPHX4Q8IUS5 362 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 ABRAQ8N0Z2 381 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 EIF1ADQ8N9N8 165 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 POLR1BQ9H9Y6 1135 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TLR8Q9NR97 1041 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 GGA3Q9NZ52 723 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 TTLL13PA6NNM8 815 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 LCA5LO95447 670 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 S100A6P06703 90 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 WARSP23381 471 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 YWHAZP63104 245 aaKnown RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 TOP3AQ13472 1001 aaPredicted RBP13.38□□□□□ -0.27
HLCS-201ENST00000336648 CSHL1Q14406 222 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 PKN1Q16512 942 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 MZT2BQ6NZ67 158 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 VN1R5Q7Z5H4 357 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 CBWD2Q8IUF1 395 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 COLGALT1Q8NBJ5 622 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 B3GALNT2Q8NCR0 500 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 BTBD10Q9BSF8 475 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 SORCS3Q9UPU3 1222 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 PTPRUQ92729 1446 aa13.38□□□□□ -0.27
HLCS-201ENST00000336648 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 TRDMT1O14717 391 aaKnown RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 PHGDHO43175 533 aaKnown RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 NTSR2O95665 410 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 THP07101 528 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 CCR1P32246 355 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 SAMD4BQ5PRF9 694 aaKnown RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 HPSEQ9Y251 543 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 PGM3O95394 542 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 CTDNEP1O95476 244 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 PCNAP12004 261 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 TRIM32Q13049 653 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 CTXN3Q4LDR2 81 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 MARC1Q5VT66 337 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms