RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ZPBP2Q6X784 338 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 ZNF786Q8N393 782 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 ATPAF2Q8N5M1 289 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 CD101Q93033 1021 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 PIWIL1Q96J94 861 aaKnown RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 TMEM109Q9BVC6 243 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 MID2Q9UJV3 735 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 ACTL7BQ9Y614 415 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 CLPTM1O96005 669 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 SETSIPP0DME0 302 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 HNRNPLP14866 589 aaKnown RBP eCLIP13.65□□□□□ -0.229e-11■■■■□ 24.8
CASC4-201ENST00000299957 PTPN7P35236 360 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 SATB1Q01826 763 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 PLD5Q8N7P1 536 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 CHST13Q8NET6 341 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 ADNPQ9H2P0 1102 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 PRG3Q9Y2Y8 225 aaPredicted RBP13.65□□□□□ -0.22
CASC4-201ENST00000299957 CSH1P0DML2 217 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 CSH2P0DML3 217 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 ALADP13716 330 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 GSTT1P30711 240 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 NEK3P51956 506 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 PDK2Q15119 407 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 FAM83EQ2M2I3 478 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 MTHFD1LQ6UB35 978 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.22
CASC4-201ENST00000299957 KLHL4Q9C0H6 718 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 E2F6O75461 281 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 ABHD2P08910 425 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 ZNF143P52747 638 aaPredicted RBP13.65□□□□□ -0.22
CASC4-201ENST00000299957 RIPK1Q13546 671 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 GPR162Q16538 588 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 SPOUT1Q5T280 376 aaKnown RBP13.65□□□□□ -0.22
CASC4-201ENST00000299957 ITPRIPL1Q6GPH6 555 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 OLFM3Q96PB7 478 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 HACD3Q9P035 362 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 COQ4Q9Y3A0 265 aa13.65□□□□□ -0.22
CASC4-201ENST00000299957 SERPINE1P05121 402 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 C12orf50Q8NA57 414 aaPredicted RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 DNAJB3Q8WWF6 145 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 MPP4Q96JB8 637 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 NDNQ99608 321 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SP110Q9HB58 689 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 PCDH18Q9HCL0 1135 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 IPO11Q9UI26 975 aaKnown RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 CLUHO75153 1309 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 ATXN2Q99700 1313 aaKnown RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 METTL18O95568 372 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 PIRTP0C851 137 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 PTK2BQ14289 1009 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SIX1Q15475 284 aaPredicted RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 CERCAMQ5T4B2 595 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 ZNF772Q68DY9 489 aaPredicted RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 BNC2Q6ZN30 1099 aaPredicted RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 CTU1Q7Z7A3 348 aaKnown RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 XYLT1Q86Y38 959 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
CASC4-201ENST00000299957 IFT43Q96FT9 208 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 TBCBQ99426 244 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SNX10Q9Y5X0 201 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 ERI2A8K979 691 aaKnown RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 CCL22O00626 93 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 GSTA4O15217 222 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 FAM200BP0CF97 657 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 CYLC2Q14093 348 aaPredicted RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 AMIGO2Q86SJ2 522 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 TRPM4Q8TD43 1214 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SLC44A1Q8WWI5 657 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SDCCAG3Q96C92 435 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 CNDP1Q96KN2 507 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SYBUQ9NX95 663 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SUN2Q9UH99 717 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SPATA31C2B4DYI2 1134 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
CASC4-201ENST00000299957 HADHAP40939 763 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 CDHR3Q6ZTQ4 885 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
CASC4-201ENST00000299957 FICDQ9BVA6 458 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 MINDY3Q9H8M7 445 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 LRRC40Q9H9A6 602 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 DCDC2Q9UHG0 476 aa13.64□□□□□ -0.23
CASC4-201ENST00000299957 RECQL4O94761 1208 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 AMHP03971 560 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 PAMP19021 973 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 GP5P40197 560 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 CXCR3P49682 368 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 VGLL4Q14135 290 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 IRGCQ6NXR0 463 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms